Clone BO33941 Report

Search the DGRC for BO33941

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG34430-RA
Protein status:BO33941.pep: Imported from assembly
Sequenced Size:826

Clone Sequence Records

BO33941.complete Sequence

826 bp assembled on 2013-05-22

GenBank Submission: KX797973

> BO33941.complete
GAAGTTATCAGTCGACATGGACGCGGTATTGGTAGTGGAAAAATCGGAAG
TCCCGGGCATCGCTGTGCAATGTGACCTCCTTTTGCCCAACGGTCATTTG
CAAAGGACCTATGAATTCGACATAGCCGATGTTGGAATCCGACGGCGCCT
AGTGCGCCGATTCTACGGCATATTAATCCTACAGATGGCCTGCACCTTGC
CCTGCATTGAGTTGTTTCTCAAATATCCTTTGCCATACAACTTTGTTATG
CCATTATCAATGGTATTCACTGTTTTTCTGTATACGTGTTTCTACGTTTG
GAGAGATTGGAGGAGACATGGGCCTTTCAACTACTTTGTACTGCTGCTGA
GCACATTGATTGGATCCTTCAATAGGAGCGTATATCTACTTAATTTGGTG
GAGACACATTGGGTATATATTTATCCAGTCATTCTCATTATTGAAATCTT
GGGTCTAATGCTGTATTCCTCCCAGAAGCGTTTTCGGTTTACCCAGATTC
GCGGAATTTCCATAATCAGCCTCATCTTTGGGCTGTTCCTCCTCCTGGCC
TACCGACTGAACCGGATGATGGAGGTCTTCTCCGCAATGGCCTGCACCGT
GGAGGCGTGGTACATAATCTACGATACACACTACATGCTGTGCGGCCGAC
ATGGCTACAACATTGGACCAGAGGAGTTCGTCTATGCAGCATGCAACATA
CACTGCGATCTGCCAAAGGGAATGTGGCGACTGATGAAGATGCTTTTCTT
CAGCAAAATTGTCGAGGCCGTTCGCATGTTCCGTGAATGCTTTAGGACCG
AGGTATGCGCAAGCTTTCTAGACCAT

BO33941.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG34430-RA 795 CG34430-PA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG34430-RA 795 CG34430-RA 1..792 17..808 3960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7944076..7944472 412..808 1985 100 Plus
2R 25286936 2R 7943664..7943900 179..415 1185 100 Plus
2R 25286936 2R 7943442..7943603 17..178 810 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:43:46 has no hits.

BO33941.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 15:04:18 Download gff for BO33941.complete
Subject Subject Range Query Range Percent Splice Strand
CG34430-RA 1..792 17..810 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:20 Download gff for BO33941.complete
Subject Subject Range Query Range Percent Splice Strand
CG34430-RA 1..792 17..810 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:42 Download gff for BO33941.complete
Subject Subject Range Query Range Percent Splice Strand
CG34430-RA 1..792 17..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:42 Download gff for BO33941.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7943664..7943897 179..412 100 -> Plus
2R 7943442..7943603 17..178 100 -> Plus
2R 7944077..7944472 413..810 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:20 Download gff for BO33941.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3831169..3831402 179..412 100 -> Plus
arm_2R 3830947..3831108 17..178 100 -> Plus
arm_2R 3831582..3831977 413..810 99   Plus

BO33941.pep Sequence

Translation from 16 to 826

> BO33941.pep
MDAVLVVEKSEVPGIAVQCDLLLPNGHLQRTYEFDIADVGIRRRLVRRFY
GILILQMACTLPCIELFLKYPLPYNFVMPLSMVFTVFLYTCFYVWRDWRR
HGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIEILGLMLY
SSQKRFRFTQIRGISIISLIFGLFLLLAYRLNRMMEVFSAMACTVEAWYI
IYDTHYMLCGRHGYNIGPEEFVYAACNIHCDLPKGMWRLMKMLFFSKIVE
AVRMFRECFRTEVCASFLDH

BO33941.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG34430-PA 264 CG34430-PA 1..264 1..264 1409 100 Plus
CG3814-PD 239 CG3814-PD 15..223 30..232 198 28.2 Plus
CG3814-PA 239 CG3814-PA 15..223 30..232 198 28.2 Plus
CG3814-PB 244 CG3814-PB 20..228 30..232 198 28.2 Plus
CG9722-PA 264 CG9722-PA 50..249 41..232 189 26.4 Plus