BO33941.complete Sequence
826 bp assembled on 2013-05-22
GenBank Submission: KX797973
> BO33941.complete
GAAGTTATCAGTCGACATGGACGCGGTATTGGTAGTGGAAAAATCGGAAG
TCCCGGGCATCGCTGTGCAATGTGACCTCCTTTTGCCCAACGGTCATTTG
CAAAGGACCTATGAATTCGACATAGCCGATGTTGGAATCCGACGGCGCCT
AGTGCGCCGATTCTACGGCATATTAATCCTACAGATGGCCTGCACCTTGC
CCTGCATTGAGTTGTTTCTCAAATATCCTTTGCCATACAACTTTGTTATG
CCATTATCAATGGTATTCACTGTTTTTCTGTATACGTGTTTCTACGTTTG
GAGAGATTGGAGGAGACATGGGCCTTTCAACTACTTTGTACTGCTGCTGA
GCACATTGATTGGATCCTTCAATAGGAGCGTATATCTACTTAATTTGGTG
GAGACACATTGGGTATATATTTATCCAGTCATTCTCATTATTGAAATCTT
GGGTCTAATGCTGTATTCCTCCCAGAAGCGTTTTCGGTTTACCCAGATTC
GCGGAATTTCCATAATCAGCCTCATCTTTGGGCTGTTCCTCCTCCTGGCC
TACCGACTGAACCGGATGATGGAGGTCTTCTCCGCAATGGCCTGCACCGT
GGAGGCGTGGTACATAATCTACGATACACACTACATGCTGTGCGGCCGAC
ATGGCTACAACATTGGACCAGAGGAGTTCGTCTATGCAGCATGCAACATA
CACTGCGATCTGCCAAAGGGAATGTGGCGACTGATGAAGATGCTTTTCTT
CAGCAAAATTGTCGAGGCCGTTCGCATGTTCCGTGAATGCTTTAGGACCG
AGGTATGCGCAAGCTTTCTAGACCAT
BO33941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34430-RA | 795 | CG34430-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34430-RA | 795 | CG34430-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:43:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7944076..7944472 | 412..808 | 1985 | 100 | Plus |
2R | 25286936 | 2R | 7943664..7943900 | 179..415 | 1185 | 100 | Plus |
2R | 25286936 | 2R | 7943442..7943603 | 17..178 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:43:46 has no hits.
BO33941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 15:04:18 Download gff for
BO33941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34430-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:20 Download gff for
BO33941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34430-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:42 Download gff for
BO33941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34430-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:42 Download gff for
BO33941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7943664..7943897 | 179..412 | 100 | -> | Plus |
2R | 7943442..7943603 | 17..178 | 100 | -> | Plus |
2R | 7944077..7944472 | 413..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:20 Download gff for
BO33941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3831169..3831402 | 179..412 | 100 | -> | Plus |
arm_2R | 3830947..3831108 | 17..178 | 100 | -> | Plus |
arm_2R | 3831582..3831977 | 413..810 | 99 | | Plus |
BO33941.pep Sequence
Translation from 16 to 826
> BO33941.pep
MDAVLVVEKSEVPGIAVQCDLLLPNGHLQRTYEFDIADVGIRRRLVRRFY
GILILQMACTLPCIELFLKYPLPYNFVMPLSMVFTVFLYTCFYVWRDWRR
HGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIEILGLMLY
SSQKRFRFTQIRGISIISLIFGLFLLLAYRLNRMMEVFSAMACTVEAWYI
IYDTHYMLCGRHGYNIGPEEFVYAACNIHCDLPKGMWRLMKMLFFSKIVE
AVRMFRECFRTEVCASFLDH
BO33941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34430-PA | 264 | CG34430-PA | 1..264 | 1..264 | 1409 | 100 | Plus |
CG3814-PD | 239 | CG3814-PD | 15..223 | 30..232 | 198 | 28.2 | Plus |
CG3814-PA | 239 | CG3814-PA | 15..223 | 30..232 | 198 | 28.2 | Plus |
CG3814-PB | 244 | CG3814-PB | 20..228 | 30..232 | 198 | 28.2 | Plus |
CG9722-PA | 264 | CG9722-PA | 50..249 | 41..232 | 189 | 26.4 | Plus |