BO33943.complete Sequence
739 bp assembled on 2013-04-22
GenBank Submission: KX795329
> BO33943.complete
GAAGTTATCAGTCGACATGCAGTTGGGAAAAGCTATCATTCTGATTTTGC
TGGCGGCCATCCAGCAAAGCTGCCTGGCTCTCTACATCAAGAGCGCGGAG
AAGAATCCAGCCAAGACTGGGCCCAAGGACGATTGGGGCGTCTTCAAGAA
CACACTCGGACTAAGCCAAGAAAAAGTTGAACTGCTAAAATCGCAAAAGG
ACCAACAAGGCACTAAGGAGCTGCTCAATCGATTCATTCTGGAGAACCCA
AAGGCACTGCCGAAGGCCAAGCCACAACCCGATCAGTTCATGGGACTCTA
CAGATCCATCCTGAAGAAGCTGACGGCATCCAAGCGCATGCTGAAGACCT
CGTTGAACTTTGAACTGGCCGACAGGCCACACAAGACCCTAAAAAGGCCG
CGCCGTAAGATCGCCGTCAAGATGGTTTCCGATATGCCATCATGGAAGAT
CGAGAGCCTGCTGAACTCATTCTATCTGAAGCACGGAATTCCACGCAACG
CCGAGGAGCACGATTATCCCGATCTTGACATGGCCAGGGATACTGATTAC
GAATCCGATAATTTCTACGACGACGAGGGAGATGTGGGTCTAACGGCCAA
GACGCGCCAGAACACTGAGTACGGATCCTTCCAGGACCTCATTATGCAGG
CCAAGATGAACGAGTGGGAGCGGGAGAGCGAAGAAACCAAATTGCACGGC
CCCGACAATGATGACTACATCGCAAGCTTTCTAGACCAT
BO33943.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13653-RA | 708 | CG13653-PA | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13653-RA | 937 | CG13653-RA | 34..738 | 17..721 | 3525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:31:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25195786..25196332 | 175..721 | 2735 | 100 | Plus |
| 3R | 32079331 | 3R | 25195560..25195719 | 17..176 | 800 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 329..375 | 214..168 | 109 | 70.2 | Minus |
BO33943.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 17:23:38 Download gff for
BO33943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13653-RA | 1..705 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:29 Download gff for
BO33943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13653-RA | 34..738 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:00 Download gff for
BO33943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13653-RA | 34..738 | 17..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:00 Download gff for
BO33943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25195560..25195719 | 17..176 | 100 | -> | Plus |
| 3R | 25195788..25196332 | 177..723 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:29 Download gff for
BO33943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21021282..21021441 | 17..176 | 100 | -> | Plus |
| arm_3R | 21021510..21022054 | 177..723 | 99 | | Plus |
BO33943.pep Sequence
Translation from 16 to 739
> BO33943.pep
MQLGKAIILILLAAIQQSCLALYIKSAEKNPAKTGPKDDWGVFKNTLGLS
QEKVELLKSQKDQQGTKELLNRFILENPKALPKAKPQPDQFMGLYRSILK
KLTASKRMLKTSLNFELADRPHKTLKRPRRKIAVKMVSDMPSWKIESLLN
SFYLKHGIPRNAEEHDYPDLDMARDTDYESDNFYDDEGDVGLTAKTRQNT
EYGSFQDLIMQAKMNEWERESEETKLHGPDNDDYIASFLDH
BO33943.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13653-PA | 235 | CG13653-PA | 1..235 | 1..235 | 1223 | 100 | Plus |
