BO33945.complete Sequence
613 bp assembled on 2013-05-23
GenBank Submission: KX798742
> BO33945.complete
GAAGTTATCAGTCGACATGTCCACCTGCATTTGCTTGGGCCCCAAAAGAG
CGGGCAAAACGCACCTTTTGAAAGCTTTACAGGATCCGGAATCCATCGAT
GAGACCACGTTTTCCATGCCCACCATTGGCACTGGGATTTACCGAATCCA
TTTCCCAACAAAATCGCCAAATGGGGATAAAAATAAGCCTCCTCCCTCAG
AAGCTCCAGCTAACATTCCTCATGGCGGTAAAAATCTGCCCAAGTCCATA
CAGATCCTGGAAATTGGAGGGAGTATGGCCCCCTTGTGGAGGCAGTATTT
CGAGGATGTCAAGAAGCTGATCTACGTCGTGGACACCTCTAATCTCTGTC
AGATTTCAGCCGCCGGCGTTCTTTTCTATTCAATCCTCACCGAGCCGCGT
CTGCAGCATAATACTAAGATCCTGTTGGTACTGGCCAAAATGGATTACTC
CTACCGCCAGATGCGAAACGAGGCTCTGCTCATGCTGCAGATGCAGAAGT
TGCAAAAACAGATCCGCCAGCAGGTGACCATCGTGGAGGCCAGCGCCGTC
ACCAAAGTGGGCTTAGACCCCATCTACGATTGGCTGCAGAGACCCGCAAG
CTTTCTAGACCAT
BO33945.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13692-RA | 582 | CG13692-PA | 1..579 | 17..595 | 2895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13692-RA | 665 | CG13692-RA | 30..608 | 17..595 | 2895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 421800..422189 | 17..406 | 1950 | 100 | Plus |
2L | 23513712 | 2L | 422243..422432 | 406..595 | 950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:44:05 has no hits.
BO33945.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-23 10:50:16 Download gff for
BO33945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13692-RA | 1..579 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:29 Download gff for
BO33945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13692-RA | 30..608 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:51 Download gff for
BO33945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13692-RA | 30..608 | 17..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:51 Download gff for
BO33945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 421800..422188 | 17..405 | 100 | -> | Plus |
2L | 422243..422432 | 406..597 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:29 Download gff for
BO33945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 421800..422188 | 17..405 | 100 | -> | Plus |
arm_2L | 422243..422432 | 406..597 | 98 | | Plus |
BO33945.pep Sequence
Translation from 16 to 613
> BO33945.pep
MSTCICLGPKRAGKTHLLKALQDPESIDETTFSMPTIGTGIYRIHFPTKS
PNGDKNKPPPSEAPANIPHGGKNLPKSIQILEIGGSMAPLWRQYFEDVKK
LIYVVDTSNLCQISAAGVLFYSILTEPRLQHNTKILLVLAKMDYSYRQMR
NEALLMLQMQKLQKQIRQQVTIVEASAVTKVGLDPIYDWLQRPASFLDH
BO33945.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13692-PA | 193 | CG13692-PA | 1..193 | 1..193 | 1006 | 100 | Plus |