Clone BO33945 Report

Search the DGRC for BO33945

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG13692-RA
Protein status:BO33945.pep: Imported from assembly
Sequenced Size:613

Clone Sequence Records

BO33945.complete Sequence

613 bp assembled on 2013-05-23

GenBank Submission: KX798742

> BO33945.complete
GAAGTTATCAGTCGACATGTCCACCTGCATTTGCTTGGGCCCCAAAAGAG
CGGGCAAAACGCACCTTTTGAAAGCTTTACAGGATCCGGAATCCATCGAT
GAGACCACGTTTTCCATGCCCACCATTGGCACTGGGATTTACCGAATCCA
TTTCCCAACAAAATCGCCAAATGGGGATAAAAATAAGCCTCCTCCCTCAG
AAGCTCCAGCTAACATTCCTCATGGCGGTAAAAATCTGCCCAAGTCCATA
CAGATCCTGGAAATTGGAGGGAGTATGGCCCCCTTGTGGAGGCAGTATTT
CGAGGATGTCAAGAAGCTGATCTACGTCGTGGACACCTCTAATCTCTGTC
AGATTTCAGCCGCCGGCGTTCTTTTCTATTCAATCCTCACCGAGCCGCGT
CTGCAGCATAATACTAAGATCCTGTTGGTACTGGCCAAAATGGATTACTC
CTACCGCCAGATGCGAAACGAGGCTCTGCTCATGCTGCAGATGCAGAAGT
TGCAAAAACAGATCCGCCAGCAGGTGACCATCGTGGAGGCCAGCGCCGTC
ACCAAAGTGGGCTTAGACCCCATCTACGATTGGCTGCAGAGACCCGCAAG
CTTTCTAGACCAT

BO33945.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13692-RA 582 CG13692-PA 1..579 17..595 2895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13692-RA 665 CG13692-RA 30..608 17..595 2895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 421800..422189 17..406 1950 100 Plus
2L 23513712 2L 422243..422432 406..595 950 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:44:05 has no hits.

BO33945.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-23 10:50:16 Download gff for BO33945.complete
Subject Subject Range Query Range Percent Splice Strand
CG13692-RA 1..579 17..597 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:29 Download gff for BO33945.complete
Subject Subject Range Query Range Percent Splice Strand
CG13692-RA 30..608 17..597 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:51 Download gff for BO33945.complete
Subject Subject Range Query Range Percent Splice Strand
CG13692-RA 30..608 17..597 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:51 Download gff for BO33945.complete
Subject Subject Range Query Range Percent Splice Strand
2L 421800..422188 17..405 100 -> Plus
2L 422243..422432 406..597 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:29 Download gff for BO33945.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 421800..422188 17..405 100 -> Plus
arm_2L 422243..422432 406..597 98   Plus

BO33945.pep Sequence

Translation from 16 to 613

> BO33945.pep
MSTCICLGPKRAGKTHLLKALQDPESIDETTFSMPTIGTGIYRIHFPTKS
PNGDKNKPPPSEAPANIPHGGKNLPKSIQILEIGGSMAPLWRQYFEDVKK
LIYVVDTSNLCQISAAGVLFYSILTEPRLQHNTKILLVLAKMDYSYRQMR
NEALLMLQMQKLQKQIRQQVTIVEASAVTKVGLDPIYDWLQRPASFLDH

BO33945.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13692-PA 193 CG13692-PA 1..193 1..193 1006 100 Plus