BO33947.complete Sequence
1603 bp assembled on 2013-05-17
GenBank Submission: KX796552
> BO33947.complete
GAAGTTATCAGTCGACATGGCTGTATTCCTCCGTCGATTTCTCTGGCTCA
TCAGTTTTACTTTGGTTTTGACTGATGATAATTCCGTTGAGAATAAATTC
TATATAGCTGGTGTAGTGGAATATAGGCCAACGTTTATGGGCGGCACTTC
GGAACAGCTGTTGCAAGCGAATCTGGCTGGTTATCTGGAGATCATGGCAT
CTGGCAATGGCACTACGGACATCATAGTCTTTCCGGAGGCCACACTAAAT
AGTGTGATTACCCTGACAGCGGTGCCGAAATTTACGGAGCAAAGTTTGTG
TGAAGAACAGGGAGATGATGATCCGGAAATAGCACCATTCCTAAGATCTT
TGGCCTGTGCCGCCAGGGAATATGGCACCTATTTGGTGGTCAATGTCAAG
GAGCGTGTTTCGGAGCAGTGTACTTCGGATGAGACATGTTCCAGTCGTGG
CTATTCGATTCACAATACCAACGTAGTGTTCGATAGACAAGGAGCGGTGA
TATCACGCTATAGGAAATGGAATCTTTACTTAGAACCATCCACCAATCGG
ACTGAATCCCCTGAAATAGCCACCTTTACAACGGATTTCAATGTGACCTT
CGGTCATTTCATCTGCTTTGATATGCTCTTTTATACGCCGGCTCAGGATT
TGGTGGAGCAACTGGGCATCCGCCATGTGATTGTCACCAAAATGTTCAAC
TCGGAGCTGCCTTTCCTCACAGCCTCTCAATTTCAGCAGGGCTGGGCGTG
GGCCAATCGGGTGAACCTTCTGGCCTCCGGAGGAAGTCTTCCGCAGGGTG
GAATAAGTGGCAGTGGAATTTACGCGGGTCAACAGGGCGCTCTGGCGAGA
CTCATGATCACGGATGAGCTGGTGGGTCAGAGAAAGTTGCTCCTGGCTAA
AGTTCCCCTCGATCCCGAGGAGCCGATAGCCACGGATGAGATCTTGGAAC
CCGAAATCATGACTCCTGTGAAACTAAAACTTCTGCAGCAACCGGAACTA
AAGAACTTTACCACCTGGGAGTTGCCCATGGTCCGGGGCAGTTCGGTGGA
CAAGAGAATATGCCAGGAGGACTTGTGCTGCGAGTTCCGGGTCACTTGGA
CCCTGGAGGACACTCAACCGGAATATAACTACCGATTGGGAGTTTGGGTG
GGACAAAGGCGCTACGAGGAGGAGCAGTACAGTGCCATCCGGCTGTGTGG
CCTGTTCGCCTGCAAAGGTGCCAGTGTAGAGAGCTGCGGCCTGGTTAGCG
AGGAGGAGGTACACCTGCAGGATCACCGAGTTGTGTTCACCGACCTGCAG
ATCCTTGGCGAGTTTGTACGGAGGCCACGACGTCTCATATTGCCCAGCAC
CCTTAGCTCCTCCAGTTTCTATGCCCTGCAACCATCCCAATTAGCATGGT
CCATGGAGGAATTGGCTAATGTAACGCGGATTAAGATGGAGCTGCGACAA
CCGCACAGCCAGCTAATGACCTTCGCCATATATGGCAACTATTTCGATGA
GTATGCAAATGGTGGAGCTGGAAGATTGGGAACCCTGCTGTTTCTCCTAA
TCACGCCGCTAATTATGATGCATCTATTTCGGGAGGCAAGCTTTCTAGAC
CAT
BO33947.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32750-RA | 1572 | CG32750-PA | 1..1569 | 17..1585 | 7830 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32750-RA | 1645 | CG32750-RA | 22..1591 | 16..1585 | 7835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:37:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6194791..6195656 | 1585..720 | 4330 | 100 | Minus |
| X | 23542271 | X | 6195712..6196418 | 722..16 | 3520 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:37:29 has no hits.
BO33947.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:32:02 Download gff for
BO33947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32750-RA | 1..1569 | 17..1587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:10:29 Download gff for
BO33947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32750-RA | 23..1591 | 17..1587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:27 Download gff for
BO33947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32750-RA | 23..1591 | 17..1587 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:27 Download gff for
BO33947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6194789..6195653 | 723..1587 | 99 | <- | Minus |
| X | 6195712..6196417 | 17..722 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:10:29 Download gff for
BO33947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6088822..6089686 | 723..1587 | 99 | <- | Minus |
| arm_X | 6089745..6090450 | 17..722 | 99 | | Minus |
BO33947.pep Sequence
Translation from 16 to 1603
> BO33947.pep
MAVFLRRFLWLISFTLVLTDDNSVENKFYIAGVVEYRPTFMGGTSEQLLQ
ANLAGYLEIMASGNGTTDIIVFPEATLNSVITLTAVPKFTEQSLCEEQGD
DDPEIAPFLRSLACAAREYGTYLVVNVKERVSEQCTSDETCSSRGYSIHN
TNVVFDRQGAVISRYRKWNLYLEPSTNRTESPEIATFTTDFNVTFGHFIC
FDMLFYTPAQDLVEQLGIRHVIVTKMFNSELPFLTASQFQQGWAWANRVN
LLASGGSLPQGGISGSGIYAGQQGALARLMITDELVGQRKLLLAKVPLDP
EEPIATDEILEPEIMTPVKLKLLQQPELKNFTTWELPMVRGSSVDKRICQ
EDLCCEFRVTWTLEDTQPEYNYRLGVWVGQRRYEEEQYSAIRLCGLFACK
GASVESCGLVSEEEVHLQDHRVVFTDLQILGEFVRRPRRLILPSTLSSSS
FYALQPSQLAWSMEELANVTRIKMELRQPHSQLMTFAIYGNYFDEYANGG
AGRLGTLLFLLITPLIMMHLFREASFLDH
BO33947.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32750-PA | 523 | CG32750-PA | 1..523 | 1..523 | 2720 | 100 | Plus |
| vanin-like-PA | 558 | CG32754-PA | 29..519 | 25..502 | 832 | 40.7 | Plus |
| CG32751-PA | 517 | CG32751-PA | 9..502 | 8..502 | 803 | 38.7 | Plus |
| CG32751-PB | 525 | CG32751-PB | 9..510 | 8..502 | 784 | 38.2 | Plus |
| Btd-PA | 553 | CG3599-PA | 25..510 | 25..495 | 619 | 36.9 | Plus |
