BO33948.complete Sequence
1108 bp assembled on 2013-05-23
GenBank Submission: KX796441
> BO33948.complete
GAAGTTATCAGTCGACATGAAAGTGTGCTGGAATTTCTTTGCTGCGGCGG
TGCTGTTAGTGACGGTCACCTCGGGGCTGAGACCCCCACGATCCTACTAT
CGGAGGAGCTACTTCAGTGCAGTGGGTTCAGGATCTGGGCACGCACCCAG
CTCTCTGCCAGGACCAGTGAGAATAGGACCCGCTAGTTACTTCCGTGCCG
ATCTGCAAACAAATGAGAGCAAGCACCGGCCACTGAGCAAAAAGTATCCC
AAGAAGAGCCACTACAGACCCTACGGATCGCAAGAGGAAGAGGACGAACA
ACGCTACAATTCCGCGGAATATTCAGGAGAGTCCTCCGTTCAGGATAGTC
GGGAATACACGATTGGCACCCAAATTCGCGTCCAGCATCCCATAACCGTG
CCCAAGAAGTCCAGTTCCGGCTACCAGAAGCAGCCAAAATATGTGACGGC
CATTCCATACAAGGCATCTGGTTATGGATCCGATATCCACAAGCCCTCCG
GTTATGGATCCGATGTTCATATTGGATCTGGAGAGGATGTTGGACCTCCT
CCGAAAAGATCGAAGTGGACCCCAGTGCAATACGAATCGGAAGCCGATCC
CTTCCATCTAGTGCCACCTCCAAAGGCAACCGTCGCCTCCAGCAGCAACT
CATATAGTGTTTATGAGCCCGAACACGATGACTACGAGGTGGTTCCAGTG
CCCCGACCAAAAAGCCACGATCGCTACAAAAGCGTCGCCTCCAAGAAACA
AGTAGAGGCCTACCTAGAGGATCAGCAGAAGCTGCTCGACGAGGCCATCA
AAGTTCAGCTTTTGAACAATCCGAAGCTGCAAAAATTCTTCAAGGCCCAG
GCGCAGGAACAGGAGCGGGAATCGCGGCCAGACCTCGAAATCGAGGATTT
TGAGGCCTATCCGCCCAACTTTTCGGGGCCCGGACACCTGCGCAACAAGT
ACATCGAACACCCACCATCTTCTCCGCCGAAGGGATCTCGATCACGCCGG
CGTCCTCCAAGTGGAGATCTTAACCGACCACCCAAGACCATCATCAAACC
GAAAAGGAAATACCGATCCACAGCACTGGTCATCAATGTGGCAAGCTTTC
TAGACCAT
BO33948.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15545-RA | 1077 | CG15545-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15545-RA | 1267 | CG15545-RA | 72..1145 | 17..1090 | 5370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30871061..30871871 | 1090..280 | 4055 | 100 | Minus |
3R | 32079331 | 3R | 30871954..30872199 | 280..35 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:44:02 has no hits.
BO33948.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-23 10:50:15 Download gff for
BO33948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15545-RA | 1..1074 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:28 Download gff for
BO33948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15545-RA | 72..1145 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:49 Download gff for
BO33948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15545-RA | 72..1145 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:49 Download gff for
BO33948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30871058..30871870 | 281..1092 | 99 | <- | Minus |
3R | 30871954..30872199 | 35..280 | 100 | <- | Minus |
3R | 30872263..30872280 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:28 Download gff for
BO33948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26696780..26697592 | 281..1092 | 99 | <- | Minus |
arm_3R | 26697676..26697921 | 35..280 | 100 | <- | Minus |
arm_3R | 26697985..26698002 | 17..34 | 100 | | Minus |
BO33948.pep Sequence
Translation from 16 to 1108
> BO33948.pep
MKVCWNFFAAAVLLVTVTSGLRPPRSYYRRSYFSAVGSGSGHAPSSLPGP
VRIGPASYFRADLQTNESKHRPLSKKYPKKSHYRPYGSQEEEDEQRYNSA
EYSGESSVQDSREYTIGTQIRVQHPITVPKKSSSGYQKQPKYVTAIPYKA
SGYGSDIHKPSGYGSDVHIGSGEDVGPPPKRSKWTPVQYESEADPFHLVP
PPKATVASSSNSYSVYEPEHDDYEVVPVPRPKSHDRYKSVASKKQVEAYL
EDQQKLLDEAIKVQLLNNPKLQKFFKAQAQEQERESRPDLEIEDFEAYPP
NFSGPGHLRNKYIEHPPSSPPKGSRSRRRPPSGDLNRPPKTIIKPKRKYR
STALVINVASFLDH
BO33948.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15545-PA | 358 | CG15545-PA | 1..358 | 1..358 | 1904 | 100 | Plus |