BO33951.complete Sequence
919 bp assembled on 2013-04-19
GenBank Submission: KX798228
> BO33951.complete
GAAGTTATCAGTCGACATGGATGGTCGTGGAACATTCCTAGTTCTTCTGA
TTTTTGGTTTTTTCAGGAACTCACAGGAAAAATTTGTTTGGTGTACGGGT
GGAGCATCTTCGCTTTTTGTGGCCATCGCTTTGCCTTTGGACTTACGGTT
TGAAAAAGCCTTTTTGTCCTATAATTTTGAAGTGTCCTACGATTTACCAA
GATCGTGGAAACAGAAACCACCGTTTTTGCGACATGGAAATGGCACGAAT
GATGAAAGTTTACTGAGTGATCACCATGGCCATCATCAGAATGATGATTT
CGTTTACGATGACTATTACGATGATGATCAAAACTCTGGTAATAAGCACA
AACACAAACACCATCCACATCATCATGATAAGAAAAAGAAGAAGAGTAAG
CCTAAGCCCGGTTCTGTTATCAAGCCACAGAAAAATAAGCCCAAGCATAA
GCATAAGAAAAAGCACAAGTCAAAGCCAAAGCCACCGCCAGAAGTGGATG
AGGATGACTACAAGGACTTCTTTCAGGGATTTCCCTTGGATGGCATGGGT
GAATCTGTGGGCAGAGATCGCCAGAGTAGGTCACTACTCTCACGCACTAA
GTTCTATTATATAATCAACCATCGGTTCGAATTGCATGGATTAGGCGCAG
GCGACAGCTGTTTATTAAGACTGATTTGTGAGGCAAATAGCTACCAATTG
GGAGATCTCAATGGTGTGCTAGGCAGCTTAATACATGTAATGTTCAGTCC
CAGCAGCTCTCGGTATGAGGAATTACCTAAGCGTTACTACATCGCAGAAT
TGGATGGTCGGAATGGCAACTGCGGAGGCTATCGAGTGCAATGTGAGCAT
AGTGTTCTCGACATGATCACGCAACCTGTGAAAAATAAAAACAAAATGCA
CGCAAGCTTTCTAGACCAT
BO33951.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34444-RA | 888 | CG34444-PA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34444-RA | 920 | CG34444-RA | 26..910 | 17..901 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14369584..14369989 | 229..634 | 2030 | 100 | Plus |
| 2R | 25286936 | 2R | 14370049..14370316 | 634..901 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 14369403..14369520 | 112..229 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 14369242..14369337 | 17..112 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:19:43 has no hits.
BO33951.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:22:33 Download gff for
BO33951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34444-RA | 1..885 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:42 Download gff for
BO33951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34444-RA | 26..910 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:13 Download gff for
BO33951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34444-RA | 26..910 | 17..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:13 Download gff for
BO33951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14369242..14369337 | 17..112 | 100 | -> | Plus |
| 2R | 14369404..14369520 | 113..229 | 100 | -> | Plus |
| 2R | 14369585..14369988 | 230..633 | 100 | -> | Plus |
| 2R | 14370049..14370316 | 634..903 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:42 Download gff for
BO33951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10256909..10257025 | 113..229 | 100 | -> | Plus |
| arm_2R | 10256747..10256842 | 17..112 | 100 | -> | Plus |
| arm_2R | 10257090..10257493 | 230..633 | 100 | -> | Plus |
| arm_2R | 10257554..10257821 | 634..903 | 99 | | Plus |
BO33951.pep Sequence
Translation from 16 to 919
> BO33951.pep
MDGRGTFLVLLIFGFFRNSQEKFVWCTGGASSLFVAIALPLDLRFEKAFL
SYNFEVSYDLPRSWKQKPPFLRHGNGTNDESLLSDHHGHHQNDDFVYDDY
YDDDQNSGNKHKHKHHPHHHDKKKKKSKPKPGSVIKPQKNKPKHKHKKKH
KSKPKPPPEVDEDDYKDFFQGFPLDGMGESVGRDRQSRSLLSRTKFYYII
NHRFELHGLGAGDSCLLRLICEANSYQLGDLNGVLGSLIHVMFSPSSSRY
EELPKRYYIAELDGRNGNCGGYRVQCEHSVLDMITQPVKNKNKMHASFLD
H
BO33951.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34444-PA | 295 | CG34444-PA | 1..295 | 1..295 | 1626 | 100 | Plus |
| CG34442-PA | 245 | CG34442-PA | 16..228 | 12..285 | 281 | 28.4 | Plus |
| CG34184-PA | 224 | CG34184-PA | 64..209 | 155..288 | 279 | 42.6 | Plus |
| CG34443-PA | 239 | CG34443-PA | 119..229 | 179..290 | 277 | 50 | Plus |
