BO33954.complete Sequence
979 bp assembled on 2013-04-22
GenBank Submission: KX797703
> BO33954.complete
GAAGTTATCAGTCGACATGCGATCCATAGATCCCGTATCCCAAATGGCAA
ACGCCACTTTGGCGGACGACGATCTGGGTAACTATGACGTTTGCCTCGAG
GATTTGCAACTGTTTGCCCAACTGGAGGATCTCTCCGGAGAAAGATTGCC
AATGGAGATGGAGCTGCTGAATCCGGGCTCGGAATACGATCTATTGGAAC
TTGTGAATGGGGCTCTCCAGCAGCGAAACACCACGGAACATAAGCCAACA
GACATGTGCAAGCCCAAGCGGACACCAACCACTAAACGCCACCGAACAAC
TGGCAAGGATCACACCTGCGACATATGCGACAGAAGATTCTCGGAAGCCT
ACAATCTGCGCATCCACAAGATGACGCACACGGACGAGAAGCCGCATGTG
TGCGTGGAGTGCGGCAAGGGATTCCGGCAACTGAACAAGCTACGCATCCA
TGCAGTGACCCACACGGCGGAGCGGCCACACAAATGTGATATCTGCGGCA
AGGGTTTCCGGTATGCCAACTACCTAACTGTCCATCGACGCTTGCACACG
GGAGAGAAACCATATCCATGTTTGGCCACCGACTGTCATCTCTCCTTTCA
TTCCATCCACGCGCGGCGCATTCACACAAAGCTAAGGCATGCGGCACAAA
CGGATCCGGATCCCGAACATCCGCTGGCGGAGCAAGAGCAACGGGATACA
TCTGCGCTCAGCTTCACCTGCCCGGTTTGCAGCCGGGTCCTAACGGATCA
GTGCTATCTTAGCATCCACCTGAAGCGGCACTACAATCAGCGCGACTTCC
CATGCCCACAGCCGGAGTGCGGCAAGAGATTCTTTAGTGCCTCGGAGCTG
AAGCACCACCAGATTGCCCACACCCAGCAGCGACCATTTGCCTGTCCACT
CTGTCCAGCACGATTTCTGCGCAAATCCAATCATAAGCAACACCTCAAGG
TGCACGAGCGTGCAAGCTTTCTAGACCAT
BO33954.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2120-RB | 948 | CG2120-PB | 1..945 | 17..961 | 4710 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2120-RB | 1155 | CG2120-RB | 48..993 | 16..961 | 4715 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:31:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8136134..8136884 | 211..961 | 3740 | 99.9 | Plus |
| X | 23542271 | X | 8135871..8136067 | 16..212 | 985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:31:36 has no hits.
BO33954.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 17:39:15 Download gff for
BO33954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2120-RB | 549..1493 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:34 Download gff for
BO33954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2120-RB | 49..993 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:04 Download gff for
BO33954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2120-RB | 49..993 | 17..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:04 Download gff for
BO33954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8135872..8136066 | 17..211 | 100 | -> | Plus |
| X | 8136135..8136884 | 212..963 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:34 Download gff for
BO33954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8029905..8030099 | 17..211 | 100 | -> | Plus |
| arm_X | 8030168..8030917 | 212..963 | 99 | | Plus |
BO33954.pep Sequence
Translation from 16 to 979
> BO33954.pep
MRSIDPVSQMANATLADDDLGNYDVCLEDLQLFAQLEDLSGERLPMEMEL
LNPGSEYDLLELVNGALQQRNTTEHKPTDMCKPKRTPTTKRHRTTGKDHT
CDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHT
AERPHKCDICGKGFRYANYLTVHRRLHTGEKPYPCLATDCHLSFHSIHAR
RIHTKLRHAAQTDPDPEHPLAEQEQRDTSALSFTCPVCSRVLTDQCYLSI
HLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCPARF
LRKSNHKQHLKVHERASFLDH
BO33954.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2120-PB | 315 | CG2120-PB | 1..315 | 1..315 | 1743 | 100 | Plus |
| CG32772-PE | 520 | CG32772-PE | 129..329 | 97..318 | 336 | 33.2 | Plus |
| CG32772-PC | 520 | CG32772-PC | 129..329 | 97..318 | 336 | 33.2 | Plus |
| Meics-PB | 571 | CG8474-PB | 251..450 | 90..313 | 328 | 32.6 | Plus |
| Meics-PA | 583 | CG8474-PA | 263..462 | 90..313 | 328 | 32.6 | Plus |
| Meics-PB | 571 | CG8474-PB | 301..509 | 87..314 | 320 | 30 | Plus |
| Meics-PB | 571 | CG8474-PB | 229..422 | 128..313 | 264 | 31.1 | Plus |
| CG32772-PE | 520 | CG32772-PE | 151..357 | 91..319 | 257 | 28.4 | Plus |
| CG32772-PC | 520 | CG32772-PC | 151..357 | 91..319 | 257 | 28.4 | Plus |
