BO33955.complete Sequence
628 bp assembled on 2013-04-19
GenBank Submission: KX793878
> BO33955.complete
GAAGTTATCAGTCGACATGTTGACCAACAACGAGCTAATGGAGCAGTTCT
ACTTCCCCGACGAAGCCCCAGCGATTCCCGAGTTCCTGAGCAACGACACC
TTCCAGCAGTTGGAGCAGCTCATGTACCAGCAGGAGTTCAGCACCAGCGA
CAGCCAGTCGGATGGCGCCAACAGTTGCTCCTTGGAGATGTATTACGATA
CGCCGTCTGTCCTGGAATTGGAGCACATGCTGAATGCCCAGGAGCAGCAG
CAGCACCACCTTCAAGCGAATCCCTTGGGCAAGAATCAGGGCAGAAGTCC
AAGGTACTGGAACAAGCAGCAGAGGAGCAAGCCATACGACAAGCTGTCCA
CTTCCATGTCATCATCTACATCCTCCGCCTCTTCGAGCAGTTCATCGTCC
GCGGGATTCGGTGGCGAAGTCCTCAAAAAACGGCGACTGGCCGCCAATGC
TCGGGAACGGAGGCGGATGAACAGCCTGAACGATGCCTTCGACAAGTTGA
GAGATGTGGTTCCATCACTCGGCCACGATCGGCGACTCTCCAAATACGAA
ACTCTGCAAATGGCGCAAGCATACATCGGGGATCTGGTCACGTTGCTGTC
CAGAGACTACGCAAGCTTTCTAGACCAT
BO33955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-RA | 597 | CG10393-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-RA | 786 | CG10393-RA | 14..609 | 15..610 | 2980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18596313..18596908 | 610..15 | 2980 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:19:47 has no hits.
BO33955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:24:14 Download gff for
BO33955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 300..888 | 22..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:44 Download gff for
BO33955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 21..609 | 22..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:15 Download gff for
BO33955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 21..609 | 22..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:15 Download gff for
BO33955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18596309..18596901 | 22..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:44 Download gff for
BO33955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18596309..18596901 | 22..612 | 99 | | Minus |
BO33955.pep Sequence
Translation from 16 to 628
> BO33955.pep
MLTNNELMEQFYFPDEAPAIPEFLSNDTFQQLEQLMYQQEFSTSDSQSDG
ANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNK
QQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRR
MNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSRDYAS
FLDH
BO33955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-PA | 198 | CG10393-PA | 1..198 | 1..198 | 1014 | 100 | Plus |
| ato-PA | 312 | CG7508-PA | 252..311 | 135..194 | 203 | 70 | Plus |
| cato-PA | 189 | CG7760-PA | 68..160 | 102..195 | 199 | 50 | Plus |
| dimm-PB | 390 | CG8667-PB | 129..212 | 111..194 | 173 | 44 | Plus |
| Fer3-PA | 195 | CG6913-PA | 63..143 | 116..195 | 170 | 50.6 | Plus |
