BO33959.complete Sequence
979 bp assembled on 2013-04-19
GenBank Submission: KX795195
> BO33959.complete
GAAGTTATCAGTCGACATGAGCTCAAACCACCGTCCTCTGGACGATTCGG
ATATCCTCCTAATACAAACCATCCGCGAGACGCCGTCGCTGTACGATCCC
CAGCTGCCCTCCTTTCGGCTGTCGCAGCGCAAAGAGGAGGACTGGGCAAA
AGTGGCGGATTTGCTAAACATCTCCATCTCAGACGCTCGGCGACGGTGGA
CGTGTCTGCGGGATCGCTATTCGCGGGAGCTTAAGCAGAAGCGCCTGCAT
CCGTCCGGCGAGTTTGGTCACAATGACTTCTTTCGGAAGATGGACTTCCT
GCGGGACTTTGTGCGCAAGAGACGCGAGCGCAGAGGACGCGAACGGGATC
GGGAACAAAAGCCAACCGGGTGGATGAAGGTTGATTTACAGCGACGGCGT
CGTACCCGCCTGCCTATTGACACAGAGACCTTGATCGAGGAGCAAGGTTC
GCACGCCTACGATGAGGGCGAGGAGCAGCACGACTACGACGCTAAGCTGG
AGTCTCATACCACACAATCGGAGACGTATTCGGTGGTCGTGGAGGCGGAC
GATGGGCAGGAGCCCGAACAGGAGAGCTTCGATGAGTTCCTGGGGGATGC
GGAGTGCGAGCAAAAGGTCAAGGTGGTCACAATTCATCCGGAAATCGCTG
CTCCGAATGCGACGTCCGCACCTGAGCCTATTGAGTCTAACCACGCGGAT
CTGAACTACTTGGTCTGTATGCCGCCCAATGCGAATCAGGAGCGAGAGCA
TTCCGCCCCAGAATTACCCAATCCCACGGCCGTCATCACCCAAAAGACTT
GCGAAACAGAGGACGACTTCTTTTGCAAGTCGATTGCCGCGTATTTGCGC
CAACTGTCGCGCGTGCACAAGATCAAGGCCAAGGTGGAGATGTACCAGAT
TCTAGAGAAGTACATACTGCTCGAGGAGTGCGGAAAGGGGTCGGGTGCGG
GCGGATCAGGCGCAAGCTTTCTAGACCAT
BO33959.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-RA | 948 | CG9437-PA | 1..945 | 17..961 | 4710 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-RA | 1081 | CG9437-RA | 68..1012 | 17..961 | 4710 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21168997..21169941 | 17..961 | 4710 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:19:38 has no hits.
BO33959.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:22:11 Download gff for
BO33959.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9437-RA | 38..982 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:39 Download gff for
BO33959.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9437-RA | 68..1012 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:12 Download gff for
BO33959.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hng1-RA | 68..1012 | 17..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:12 Download gff for
BO33959.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21168997..21169941 | 17..963 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:39 Download gff for
BO33959.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17056502..17057446 | 17..963 | 99 | | Plus |
BO33959.pep Sequence
Translation from 16 to 979
> BO33959.pep
MSSNHRPLDDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLL
NISISDARRRWTCLRDRYSRELKQKRLHPSGEFGHNDFFRKMDFLRDFVR
KRRERRGRERDREQKPTGWMKVDLQRRRRTRLPIDTETLIEEQGSHAYDE
GEEQHDYDAKLESHTTQSETYSVVVEADDGQEPEQESFDEFLGDAECEQK
VKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPEL
PNPTAVITQKTCETEDDFFCKSIAAYLRQLSRVHKIKAKVEMYQILEKYI
LLEECGKGSGAGGSGASFLDH
BO33959.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-PA | 315 | CG9437-PA | 1..315 | 1..315 | 1662 | 100 | Plus |