BO33965.complete Sequence
577 bp assembled on 2013-04-22
GenBank Submission: KX799564
> BO33965.complete
GAAGTTATCAGTCGACATGCGATTCCAATTCGTCCTGGCCTTTGGTCTTA
TTGCCATCTTGGCGACCGCTTATGCTGGTGGCGATACCACAGGCACCGGC
AGCACGGGCACCGATACTACGGGGACCGGGAGCACGGGCACCGGGAGCAC
GGGCACCGGTAGCACCGGGAGCACGGGCACCGGTAGCACGGGCACTGGCA
GCACCGGGAGCACGGGCACCGGTAGCACGGGCACTGGCAGCACCGGAAGC
ACGGGTACAGGCAGCACCGGAAGTACGGCCACTGGCAGCACCGGAAGTAC
GGGATCAACCACCTCTGGCAGCCCCAGCACCTCAACTGGCTCATCCTCGA
CTAATCCGTCTCCTTCCACAACCTCGCCCTCCACATCGCCCACCACGTCC
ACCTCCCCGAGCGACTCCTCATCCTCCGGCTCCAGCAGTAGCTCTTCGTC
ATCCAAGCGGAACCGCAAGGAGAGGCGTCGTCGCTACCGACGTCGTCAGA
GACGCCAGGAGAGACGCCGTGAGAGGAGGGAGCGCCAGCGCCAGCAGCGC
CGTCGGGGCGCAAGCTTTCTAGACCAT
BO33965.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-RB | 546 | CG13560-PB | 1..543 | 17..559 | 2715 | 100 | Plus |
| CG13560-RA | 546 | CG13560-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
| CG13560-RB | 546 | CG13560-PB | 122..212 | 201..291 | 215 | 82.4 | Plus |
| CG13560-RA | 546 | CG13560-PA | 122..212 | 201..291 | 215 | 82.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:32:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-RB | 918 | CG13560-RB | 40..582 | 17..559 | 2715 | 100 | Plus |
| CG13560-RA | 659 | CG13560-RA | 40..582 | 17..559 | 2715 | 100 | Plus |
| CG13560-RB | 918 | CG13560-RB | 161..251 | 201..291 | 215 | 82.4 | Plus |
| CG13560-RA | 659 | CG13560-RA | 161..251 | 201..291 | 215 | 82.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:32:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23747599..23748141 | 17..559 | 2715 | 100 | Plus |
| 2R | 25286936 | 2R | 23747720..23747810 | 201..291 | 215 | 82.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:32:27 has no hits.
BO33965.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 17:47:26 Download gff for
BO33965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 27..569 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:44 Download gff for
BO33965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 27..569 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:13 Download gff for
BO33965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 40..582 | 17..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:13 Download gff for
BO33965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23747599..23748141 | 17..561 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:44 Download gff for
BO33965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19635122..19635664 | 17..561 | 99 | | Plus |
BO33965.pep Sequence
Translation from 16 to 577
> BO33965.pep
MRFQFVLAFGLIAILATAYAGGDTTGTGSTGTDTTGTGSTGTGSTGTGST
GSTGTGSTGTGSTGSTGTGSTGTGSTGSTGTGSTGSTATGSTGSTGSTTS
GSPSTSTGSSSTNPSPSTTSPSTSPTTSTSPSDSSSSGSSSSSSSSKRNR
KERRRRYRRRQRRQERRRERRERQRQQRRRGASFLDH
BO33965.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-PB | 181 | CG13560-PB | 1..181 | 1..181 | 907 | 100 | Plus |
| CG13560-PA | 181 | CG13560-PA | 1..181 | 1..181 | 907 | 100 | Plus |
| CG34105-PA | 157 | CG34105-PA | 1..150 | 1..181 | 276 | 40.9 | Plus |
| CG12491-PA | 157 | CG12491-PA | 1..150 | 1..181 | 276 | 40.9 | Plus |
| CG14852-PA | 174 | CG14852-PA | 7..164 | 6..179 | 221 | 36.4 | Plus |
