BO33966.complete Sequence
865 bp assembled on 2013-04-22
GenBank Submission: KX794428
> BO33966.complete
GAAGTTATCAGTCGACATGTTTGGAGTATTGAAGTTTGGATCCATCCTGG
TGTCCCTCCTATTTCTGGCCACCAGTCATGCGGATGTTTTCGATGAGTGT
AACGATGGTAACAACCTATCCTTTGTTACTTCGCCAAAGAGTTGCGCACA
TTATATCTTCTGCAACGGCGATGAGTCATACGATGGTGAATGCGAGGATG
GCGAATACTTTAGTCAAGATATGGAAATGTGTGAGCCCATGGGCGATATC
GACTGTCGCACGGGATCGGAGGTGCAAAGGGAAAACACTACCGACAGCTC
CTCAACGGAGATTACCTCGGAGTCCAGTACGATTTCCACAGTTGTAATCA
CCACATTAGCCCCATCGGCAGTGGTCACATTACGACCATCAGTCAATCAA
AGTGGAGCCAGCAGTACGACTTCCGTATCGCCTGCTATAGAGATTATTGT
GACCAATGTGTGCCCACAACTGGATAATCAGAGTCGTATCGCATTGCTGC
CAAATCAGAACTCCTGTTCAGATTATTACATTTGCTATCGCGGTGTGGCA
CTTCCCATGAGTTGTGCCACCAGTTTGCACTTTAATTCACTCACCGGAAA
ATGCGATCATCCCGAAAACGTTAGGTGTTTGGCCATGACTTATAATCCCA
GGGAGCAGTGCAAGCGACATGTAATCGATGTTTATCCGCATTCCGACAAC
TGCAATTACTTTTACCAGTGTCGCTCTGGCTATTTGATGGTCCAGCAGTG
TCCTTTCTTCTACGGATGGGACTACGAGAAGCGATCCTGTGTAGCACTAG
GTCAAGCCAAATGCTACAACAAGCTGCAAATGCAAATGAAAATTTATGCA
AGCTTTCTAGACCAT
BO33966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:32:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-RA | 834 | CG33985-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:32:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-RA | 860 | CG33985-RA | 6..836 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15526192..15526807 | 632..17 | 3080 | 100 | Minus |
| 3L | 28110227 | 3L | 15525915..15526131 | 847..631 | 1085 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:32:37 has no hits.
BO33966.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 17:47:31 Download gff for
BO33966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 7..831 | 23..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:47 Download gff for
BO33966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 12..836 | 23..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:14 Download gff for
BO33966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 12..836 | 23..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:14 Download gff for
BO33966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15525913..15526130 | 632..849 | 99 | <- | Minus |
| 3L | 15526193..15526801 | 23..631 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:47 Download gff for
BO33966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15519013..15519230 | 632..849 | 99 | <- | Minus |
| arm_3L | 15519293..15519901 | 23..631 | 100 | | Minus |
BO33966.pep Sequence
Translation from 16 to 865
> BO33966.pep
MFGVLKFGSILVSLLFLATSHADVFDECNDGNNLSFVTSPKSCAHYIFCN
GDESYDGECEDGEYFSQDMEMCEPMGDIDCRTGSEVQRENTTDSSSTEIT
SESSTISTVVITTLAPSAVVTLRPSVNQSGASSTTSVSPAIEIIVTNVCP
QLDNQSRIALLPNQNSCSDYYICYRGVALPMSCATSLHFNSLTGKCDHPE
NVRCLAMTYNPREQCKRHVIDVYPHSDNCNYFYQCRSGYLMVQQCPFFYG
WDYEKRSCVALGQAKCYNKLQMQMKIYASFLDH
BO33966.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-PA | 277 | CG33985-PA | 1..277 | 1..277 | 1497 | 100 | Plus |
| obst-H-PA | 269 | CG33983-PA | 12..248 | 14..267 | 519 | 37.6 | Plus |
| CG13837-PA | 223 | CG13837-PA | 2..208 | 3..269 | 256 | 28.4 | Plus |
| CG33986-PB | 277 | CG33986-PB | 49..272 | 36..272 | 236 | 24.8 | Plus |
| CG33263-PA | 227 | CG33263-PA | 5..224 | 5..268 | 232 | 24.9 | Plus |
