BO33969.complete Sequence
1112 bp assembled on 2013-04-19
GenBank Submission: KX798448
> BO33969.complete
GAAGTTATCAGCTCGACATGTCAAACCTCCAGTTAACTCAGGAAAAACTA
GATGCCCTACGCTCCGAATACAGGCCACGCCGGCCGTGCGCCCTGCTGAA
ATATCCTCGACCCAAGACAAAGCCGGAGTACCAGGCGATATATCCGTGGT
TGCTCCCGGATGAGACGGATCCGCACTTCGTGTTCTGCGCGGTGTGCGAG
TGCAGGCTCAGCTGCAAGAGATCTGATCTGGGAAAGCACGAGGGTAGCAT
TAAGCACTCGGAAAATGCACAAAGAAAATCATTGCCAGCCAAGGCAAACA
ATTCGAGCTTCAATGGATCCAGCTCCGGTGCGATGAAGTGGGAGGATACC
GAGGACGAGGAGGGTCTACTACAATACGGAACAGATCCCCAAGACGACGA
GACAGAAGATGAGGAGGAGGGAGAACTTGACGAAACAGAGGGCGACTGCG
AGGACGATGAGAAGCGGACTCAAGAACTGGAAGCACAAAATGATCTCGAA
ACGGAGCCCGTCATTAAGCAGCAGCGCCGCACTTCGGAGACCGACTCACA
GAATTCTGGCATGCTGGATTATCTGCCACTACACGTGACCATCAACGAGG
GGCCTCAAAGTCTTCCGACCACTGTCTCCGCCTATCCCACATCCTCAGCA
ACAGCAACAGTAGCTCCGCCATGCAGGATCACCATTAAAAAAGTTCCAGT
GCACAGTACTCCACTCAGTGGGATGTGCCAAGCTCAGGAGATCAATTCCA
AGGCCACCATAACGCCTATACACACGACGCCCTCCTATGCTGCCCGCCCG
CTGCAATCTTATCAACTGCAACCATTGTCACCTATAACGCCACCGCGCGA
CTCATTGGAGCTGTTCTTCGACAGCATATGTGCCACCGTCAAGAACTTGC
CGCCCAAACTGGCCACCGAGGGTAAGATCCGGGTAATGCAGCTCATTGGG
GAGCTCGAGTTGCGTGCTCTTTGCGAACAGGAGGCGCTCTCTGAGGTCGC
CGGACTTCCGGATCTCGCGGGAAACTCCAGGTCTGGAGCAGCTGAAGCCT
CAGGCAGTGGTCAGCAGAATGCGACAGTGGCTTCTACCACCAAAGCAAGC
TTTCTAGACCAT
BO33969.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ravus-RA | 1080 | CG15889-PA | 1..1077 | 18..1094 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ravus-RA | 1269 | CG15889-RA | 64..1140 | 18..1094 | 5385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13262862..13263906 | 1094..50 | 5225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:19:52 has no hits.
BO33969.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:24:38 Download gff for
BO33969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ravus-RA | 35..1112 | 17..1096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:45 Download gff for
BO33969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ravus-RA | 63..1140 | 17..1096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:16 Download gff for
BO33969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ravus-RA | 63..1140 | 17..1096 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:16 Download gff for
BO33969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13262860..13263906 | 50..1096 | 99 | <- | Minus |
3R | 13263967..13263998 | 17..49 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:45 Download gff for
BO33969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9088582..9089628 | 50..1096 | 99 | <- | Minus |
arm_3R | 9089689..9089720 | 17..49 | 96 | | Minus |
BO33969.pep Sequence
Translation from 17 to 1112
> BO33969.pep
MSNLQLTQEKLDALRSEYRPRRPCALLKYPRPKTKPEYQAIYPWLLPDET
DPHFVFCAVCECRLSCKRSDLGKHEGSIKHSENAQRKSLPAKANNSSFNG
SSSGAMKWEDTEDEEGLLQYGTDPQDDETEDEEEGELDETEGDCEDDEKR
TQELEAQNDLETEPVIKQQRRTSETDSQNSGMLDYLPLHVTINEGPQSLP
TTVSAYPTSSATATVAPPCRITIKKVPVHSTPLSGMCQAQEINSKATITP
IHTTPSYAARPLQSYQLQPLSPITPPRDSLELFFDSICATVKNLPPKLAT
EGKIRVMQLIGELELRALCEQEALSEVAGLPDLAGNSRSGAAEASGSGQQ
NATVASTTKASFLDH
BO33969.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ravus-PA | 359 | CG15889-PA | 1..359 | 1..359 | 1875 | 100 | Plus |
CG43342-PA | 180 | CG31169-PA | 103..157 | 271..326 | 152 | 55.4 | Plus |