BO33974.complete Sequence
868 bp assembled on 2013-04-22
GenBank Submission: KX797389
> BO33974.complete
GAAGTTATCAGTCGACATGTCGAACTTCAGTGCCTGCGCAGTGTGCGGCG
ATCAGAGCTCCGGGAAGCACTACGGCGTGTCCTGCTGCGATGGGTGCTCC
TGCTTTTTCAAGCGGAGCGTGCGGCGCGGGAGCAGCTACGCCTGCATCGC
TCTGGTCGGGAACTGTGTGGTGGACAAGGCGCGGCGGAACTGGTGTCCCT
CCTGCCGCTTCCAGCGATGCCTGGCCGTGGGAATGAACGCTGCTGCGGTT
CAGGAGGAGCGCGGTCCGCGCAACCAGCAGGTGGCTCTCTACCGCACTGG
CCGGAGACAAGCTCCGCCATCTCAGGCGGCGCCATCCCCGACGCCCCACT
CCCAGGCGCTGCACTTCCAGATCCTCGCCCAGATCCTTGTCACGTGCCTG
CGCCAGGCGAAGGCCAACGAGCAGTTCGCTCTGTTGGATCGCTGCCAACA
AGACGCCATCTTTCAGGTGGTGTGGAGCGAGATCTTCGTCCTGCGAGCGT
CCCACTGGTCTCTGGACATCAGCGCCATGATCGACGGCTGCGGCGATGAG
CAGCTCAAACGGCTCATTTGCGAGGCCCACCAGCTAAGGGCCGACGTCCT
GGAACTCAACTTTATGGAGTCCCTAATCCTGTGCAGAAAAGAATTGGCCA
TCAATGCGGAGTATGCCGTTATCCTGGGAAGCCACTCTAAAGCCGCCCTG
ATCTCCTTAGCCCGCTACACCCTGCAGCAATCCAACTACCTGCGGTTCGG
ACAACTGCTCCTTGGTCTGAGGCAGCTGTGCCTGAGGCGCTTCGACTGCG
CGCTTTCTTGTATGTTTCGCAGCGTGGTCAGGGACATCTTAAAAACACTA
GCAAGCTTTCTAGACCAT
BO33974.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hr83-RA | 837 | CG10296-PA | 1..833 | 17..849 | 4165 | 100 | Plus |
dsf-RB | 2076 | CG9019-PB | 43..120 | 41..118 | 195 | 83.3 | Plus |
dsf-RA | 2076 | CG9019-PA | 43..120 | 41..118 | 195 | 83.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:32:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hr83-RA | 837 | CG10296-RA | 1..833 | 17..849 | 4165 | 100 | Plus |
dsf-RB | 3537 | CG9019-RB | 298..375 | 41..118 | 195 | 83.3 | Plus |
dsf-RA | 3042 | CG9019-RA | 298..375 | 41..118 | 195 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:32:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6349242..6349867 | 16..641 | 3130 | 100 | Plus |
3R | 32079331 | 3R | 6350299..6350508 | 640..849 | 1050 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:32:43 has no hits.
BO33974.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 17:52:04 Download gff for
BO33974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hr83-RA | 1..837 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:49 Download gff for
BO33974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hr83-RA | 1..837 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:15 Download gff for
BO33974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hr83-RA | 1..837 | 17..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:15 Download gff for
BO33974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6349243..6349867 | 17..641 | 100 | -> | Plus |
3R | 6350301..6350508 | 642..852 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:49 Download gff for
BO33974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2176023..2176230 | 642..852 | 98 | | Plus |
arm_3R | 2174965..2175589 | 17..641 | 100 | -> | Plus |
BO33974.pep Sequence
Translation from 16 to 868
> BO33974.pep
MSNFSACAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNC
VVDKARRNWCPSCRFQRCLAVGMNAAAVQEERGPRNQQVALYRTGRRQAP
PSQAAPSPTPHSQALHFQILAQILVTCLRQAKANEQFALLDRCQQDAIFQ
VVWSEIFVLRASHWSLDISAMIDGCGDEQLKRLICEAHQLRADVLELNFM
ESLILCRKELAINAEYAVILGSHSKAALISLARYTLQQSNYLRFGQLLLG
LRQLCLRRFDCALSCMFRSVVRDILKTLASFLDH
BO33974.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hr83-PA | 278 | CG10296-PA | 1..278 | 1..278 | 1457 | 100 | Plus |
Hr51-PC | 582 | CG16801-PC | 111..190 | 7..86 | 285 | 65 | Plus |
tll-PA | 452 | CG1378-PA | 34..125 | 7..93 | 270 | 55.4 | Plus |
dsf-PB | 691 | CG9019-PB | 13..123 | 7..116 | 260 | 47.8 | Plus |
dsf-PA | 691 | CG9019-PA | 13..123 | 7..116 | 260 | 47.8 | Plus |