Clone BO33984 Report

Search the DGRC for BO33984

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG14673-RA
Protein status:BO33984.pep: Imported from assembly
Sequenced Size:450

Clone Sequence Records

BO33984.complete Sequence

450 bp assembled on 2013-04-19

> BO33984.complete
GAAGTTATCAGTCGACATGAAATTGAGCTACACCTGTGGCGCCCCAGCGG
ATTCAGGGGCTCCCACTTTGAACGAGGCAAAGCCAGATGATTCCGATGAG
TCCGTAGAGACCTCTCCACCGACCTACTGGAACAGTGGGTATTGGATAAC
GACCACACCGCTGCCGCCGATCACCAACTTGCCGGGTGCGGACAAGGAGG
TCCTGTGCCAATTTCTGGGTTTCTTCGAGGCATTTAGAATGCTACTCTTC
ACGCTTCTCTGGGGCGCTAACATGGAGTTCTGTCCAACGCGGAGAAGCAC
GTCGCCAGCGAGCTTCGAGAGGAAATTGAAAGGCAGCGCAACTCATCCTC
GGACCGCAAGTACATGGAAATGGACCCAACGCAAGCGAACGCAGAGCAAG
CTTTCTAGACCGATTCGTTGGGGCGGCCGCGAAAAGGGGGGGAGGGGTTA

BO33984.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 13:19:57 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 13:19:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5626498..5626866 393..25 1845 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:19:56 has no hits.

BO33984.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:25:52 Download gff for BO33984.complete
Subject Subject Range Query Range Percent Splice Strand
CG14673-RA 1..381 17..396 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:17 Download gff for BO33984.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5626498..5626866 25..393 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:17 Download gff for BO33984.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5626498..5626866 25..393 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:48 Download gff for BO33984.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1452220..1452588 25..393 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:48 Download gff for BO33984.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1452220..1452588 25..393 100   Minus

BO33984.pep Sequence

Translation from 16 to 448

> BO33984.pep
MKLSYTCGAPADSGAPTLNEAKPDDSDESVETSPPTYWNSGYWITTTPLP
PITNLPGADKEVLCQFLGFFEAFRMLLFTLLWGANMEFCPTRRSTSPASF
ERKLKGSATHPRTASTWKWTQRKRTQSKLSRPIRWGGREKGGRG
Sequence BO33984.pep has no blast hits.