Clone BO33986 Report

Search the DGRC for BO33986

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptBtd-RA
Protein status:BO33986.pep: Imported from assembly
Sequenced Size:1693

Clone Sequence Records

BO33986.complete Sequence

1693 bp assembled on 2013-05-17

GenBank Submission: KX796660

> BO33986.complete
GAAGTTATCAGTCGACATGAAGTCGATTCAATTGAGTTTTCTACTCTTGT
CAGTGCTCTTCAGCAGTTCGCATCAGCTTTCCAAGCCGGAAGATCCAACC
TATACGGCAGCAGTGGTGGAGCACAGCCAGCCAGTGGGCGATTCTCCGCG
TGCACGCACCACCTCAGCTTCGGAATCCTTTCAAAAGATCATCCGTGAAG
TCGGCGATGTGGACATCATAGTGTTTCCCGAGCACATACTCAATAGTCAG
GCCACAGCCACTTTTGTGCCCCATGAGTCGCAGAACATAACGCCCTGCTA
CCAAACGGACTATGAGCTCTTCCTCATCGAGCTATCCTGCTCGGCGAGGG
CTAACCACCTGTATGTGGTCATAAACGTGGTGGAGAAGGAACTGTGTGCC
CATGGAGCTGGTTCTGACACCTACAATCCTTGTCCATCGTCTGGCGTTCG
GTACTTCAACACAAATGTCGTGTTCGATCGAAGGGGCAGGATTGTCTCGC
GTTACAGAAAAACCCATTTGTGGCGACACGAGTATGTCTCGACATCAGTG
CTCCGATCTCCGGATATATCCATCTTTAGGACAGACTTTGGCGTAACCTT
TGGTCATTTCATCTGCTTCGACATGTTGTTCTATGATCCGGCGATGAAAT
TGGTGAAGGAGCACAAGATCACGGACATCGTGTATCCAACCTATTGGTTC
TCGGAATTGCCATTCCTTGGCGCTGTACAACTCCAAGAGGGTTGGGCATT
TGGTAATGATGTTAATGTTCTAGCCGCAGATGCCAGTAATCCCGATGGAC
GCACTTCCGGTTCGGGTATCTATGCAGGACGCGGTGGCCGATTGGTGGCG
GAGATTTTCGAGCAGCCCACCACTAAGTTGCTGATTGCGGAGGTGCCGAA
GAGGGAACATGGCCAACTGGCACCCACTTTTACGCCGATCTTCGAGCCGC
AGAGGAAAACGCAAAGATTGACTGGCCTGGCCACGTACCGGGATAATAAT
GTGGATATATTCGAAAGTGAATTGTTGGACGATGATTTTCTGAGTTTCGA
ACGCCAGTTGTGCCATGGCAGCTTTTGCTGTACCTTCTCCATCGAACGAA
AGGTCACCAGTGCCGCGGAGAACGAGTTGCCCTCCAGTGGGGCCAAGTCA
TATCGCTATAGGATCGGCGTCTACTGGGGCAACGAGACCACCGTCATTGG
CGTGGATCGCACGGAGCAGGCAACTTGTGCACTCTTTGCCTGCACGGATG
TGCGTCTCGCGAGTTGTGGCTACATCTATCCGGAGAACGAGGAGGTCATC
AATACGCATCATTTCACCAAGCTGAGTATCTCGGGCAATTTTCCAGCTGC
TCCACGTGGCCGACGATTGATCATGCCCAGCTCCTTGAATGCTCTATTTC
TGCCCGTTTCGGTTTCCGATTATGAATGGATTGAATCACCAGAGGCGGCG
AATAATCTAGACAAGACAATATTGGTCGATTTGAAACTAGCGAAGGCACA
GAACGATCTGCTAACCTTTGCCATTTGGGCCAACTACTACACCGATATAC
CCAGTACTCACAACTTGGATCACATGCAGCCGAATGGAACTCAGTCCAAT
CCTTCGACTTCCGCATCCTCGACAGTTTCGGCATTCTGGATTTTATGTGT
CCTCAACTGTTTCATCAGCGTATTAGCAAGCTTTCTAGACCAT

BO33986.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Btd-RA 1662 CG3599-PA 1..1659 17..1675 8265 99.9 Plus
vanin-like-RA 1677 CG32754-PA 573..626 580..633 195 90.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Btd-RA 1907 CG3599-RA 34..1692 17..1675 8265 99.9 Plus
vanin-like-RA 1864 CG32754-RA 590..643 580..633 195 90.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6217483..6219083 1675..75 7975 99.9 Minus
X 23542271 X 6219235..6219294 76..17 300 100 Minus
X 23542271 X 6201853..6201906 633..580 195 90.7 Minus
Blast to na_te.dros performed on 2014-11-28 13:37:45 has no hits.

BO33986.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:32:09 Download gff for BO33986.complete
Subject Subject Range Query Range Percent Splice Strand
Btd-RA 1..1659 17..1677 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:10:37 Download gff for BO33986.complete
Subject Subject Range Query Range Percent Splice Strand
Btd-RA 34..1692 17..1677 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:33 Download gff for BO33986.complete
Subject Subject Range Query Range Percent Splice Strand
Btd-RA 34..1692 17..1677 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:33 Download gff for BO33986.complete
Subject Subject Range Query Range Percent Splice Strand
X 6219235..6219294 17..76 100   Minus
X 6217481..6219081 77..1677 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:10:37 Download gff for BO33986.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6113268..6113327 17..76 100   Minus
arm_X 6111514..6113114 77..1677 99 <- Minus

BO33986.pep Sequence

Translation from 16 to 1693

> BO33986.pep
MKSIQLSFLLLSVLFSSSHQLSKPEDPTYTAAVVEHSQPVGDSPRARTTS
ASESFQKIIREVGDVDIIVFPEHILNSQATATFVPHESQNITPCYQTDYE
LFLIELSCSARANHLYVVINVVEKELCAHGAGSDTYNPCPSSGVRYFNTN
VVFDRRGRIVSRYRKTHLWRHEYVSTSVLRSPDISIFRTDFGVTFGHFIC
FDMLFYDPAMKLVKEHKITDIVYPTYWFSELPFLGAVQLQEGWAFGNDVN
VLAADASNPDGRTSGSGIYAGRGGRLVAEIFEQPTTKLLIAEVPKREHGQ
LAPTFTPIFEPQRKTQRLTGLATYRDNNVDIFESELLDDDFLSFERQLCH
GSFCCTFSIERKVTSAAENELPSSGAKSYRYRIGVYWGNETTVIGVDRTE
QATCALFACTDVRLASCGYIYPENEEVINTHHFTKLSISGNFPAAPRGRR
LIMPSSLNALFLPVSVSDYEWIESPEAANNLDKTILVDLKLAKAQNDLLT
FAIWANYYTDIPSTHNLDHMQPNGTQSNPSTSASSTVSAFWILCVLNCFI
SVLASFLDH

BO33986.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Btd-PA 553 CG3599-PA 1..553 1..553 2910 100 Plus
vanin-like-PA 558 CG32754-PA 8..510 4..508 830 39.6 Plus
CG32751-PA 517 CG32751-PA 13..495 9..510 759 37.9 Plus
CG32751-PB 525 CG32751-PB 13..503 9..510 740 37.4 Plus
CG32750-PA 523 CG32750-PA 25..495 25..510 619 36.9 Plus