BO33992.complete Sequence
472 bp assembled on 2013-04-19
GenBank Submission: KX797717
> BO33992.complete
GAAGTTATCAGTCGACATGCGTAGCTGGTTTTTATTTGGATTATATGCGC
TGCTAATCGCCGCAACAGTTGGCCAACCGCTGCAGCAAAATGAGTCCGGA
AAAAACGAGGATAGCGAAAGGAGCGAGCGAGTGAGTCGCCAAATTCCCTA
TTTGGGTGGCTACGGAGGATATGGTAGTGGCTACGGCGGATTTGGAGGAG
GCTATGGAGGCTACGGAGGCTATGGCGGCTATGGCGGACTCGGCGGTTAT
GGGGGATACGGGGGCTATGGAAGCTACGCCGGCATACGCTCCTCACTTTA
TCCCTACGGCAATCTGTATGGCGGCAGCGGCTTGGGACTGGCGGGCGGAT
ATTATGGTCGTCCTTATGGTTATGGCGGTGGCTATAATATTGGATATCCG
GCCATTGGCGGCTTCGGTGCCACCGGCGGCGGCATCTTTGGTGTTAGTCC
ATTCGCAAGCTTTCTAGACCAT
BO33992.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9269-RA | 441 | CG9269-PA | 1..438 | 17..454 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9269-RA | 576 | CG9269-RA | 88..525 | 17..454 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13616004..13616441 | 17..454 | 2190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:20:13 has no hits.
BO33992.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:27:38 Download gff for
BO33992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9269-RA | 1..438 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:55 Download gff for
BO33992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9269-RA | 88..525 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:23 Download gff for
BO33992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9269-RA | 88..525 | 17..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:23 Download gff for
BO33992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13616004..13616441 | 17..456 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:55 Download gff for
BO33992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9441726..9442163 | 17..456 | 99 | | Plus |
BO33992.pep Sequence
Translation from 16 to 472
> BO33992.pep
MRSWFLFGLYALLIAATVGQPLQQNESGKNEDSERSERVSRQIPYLGGYG
GYGSGYGGFGGGYGGYGGYGGYGGLGGYGGYGGYGSYAGIRSSLYPYGNL
YGGSGLGLAGGYYGRPYGYGGGYNIGYPAIGGFGATGGGIFGVSPFASFL
DH
BO33992.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9269-PA | 146 | CG9269-PA | 1..146 | 1..146 | 815 | 100 | Plus |
CG2157-PA | 245 | CG2157-PA | 62..175 | 45..147 | 197 | 49.6 | Plus |
CG2157-PB | 247 | CG2157-PB | 62..159 | 45..139 | 193 | 52 | Plus |
sqd-PD | 178 | CG16901-PD | 67..160 | 47..141 | 190 | 49.5 | Plus |
CG14191-PA | 193 | CG14191-PA | 37..138 | 47..148 | 189 | 48.1 | Plus |
CG2157-PB | 247 | CG2157-PB | 133..234 | 46..148 | 165 | 41.7 | Plus |
CG2157-PA | 245 | CG2157-PA | 131..239 | 46..122 | 148 | 40.4 | Plus |
sqd-PD | 178 | CG16901-PD | 91..169 | 45..132 | 147 | 50 | Plus |
CG2157-PA | 245 | CG2157-PA | 123..232 | 46..148 | 141 | 40.2 | Plus |