Clone BO33992 Report

Search the DGRC for BO33992

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG9269-RA
Protein status:BO33992.pep: Imported from assembly
Sequenced Size:472

Clone Sequence Records

BO33992.complete Sequence

472 bp assembled on 2013-04-19

GenBank Submission: KX797717

> BO33992.complete
GAAGTTATCAGTCGACATGCGTAGCTGGTTTTTATTTGGATTATATGCGC
TGCTAATCGCCGCAACAGTTGGCCAACCGCTGCAGCAAAATGAGTCCGGA
AAAAACGAGGATAGCGAAAGGAGCGAGCGAGTGAGTCGCCAAATTCCCTA
TTTGGGTGGCTACGGAGGATATGGTAGTGGCTACGGCGGATTTGGAGGAG
GCTATGGAGGCTACGGAGGCTATGGCGGCTATGGCGGACTCGGCGGTTAT
GGGGGATACGGGGGCTATGGAAGCTACGCCGGCATACGCTCCTCACTTTA
TCCCTACGGCAATCTGTATGGCGGCAGCGGCTTGGGACTGGCGGGCGGAT
ATTATGGTCGTCCTTATGGTTATGGCGGTGGCTATAATATTGGATATCCG
GCCATTGGCGGCTTCGGTGCCACCGGCGGCGGCATCTTTGGTGTTAGTCC
ATTCGCAAGCTTTCTAGACCAT

BO33992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG9269-RA 441 CG9269-PA 1..438 17..454 2190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG9269-RA 576 CG9269-RA 88..525 17..454 2190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13616004..13616441 17..454 2190 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:20:13 has no hits.

BO33992.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:27:38 Download gff for BO33992.complete
Subject Subject Range Query Range Percent Splice Strand
CG9269-RA 1..438 17..456 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:55 Download gff for BO33992.complete
Subject Subject Range Query Range Percent Splice Strand
CG9269-RA 88..525 17..456 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:23 Download gff for BO33992.complete
Subject Subject Range Query Range Percent Splice Strand
CG9269-RA 88..525 17..456 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:23 Download gff for BO33992.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13616004..13616441 17..456 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:55 Download gff for BO33992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9441726..9442163 17..456 99   Plus

BO33992.pep Sequence

Translation from 16 to 472

> BO33992.pep
MRSWFLFGLYALLIAATVGQPLQQNESGKNEDSERSERVSRQIPYLGGYG
GYGSGYGGFGGGYGGYGGYGGYGGLGGYGGYGGYGSYAGIRSSLYPYGNL
YGGSGLGLAGGYYGRPYGYGGGYNIGYPAIGGFGATGGGIFGVSPFASFL
DH

BO33992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9269-PA 146 CG9269-PA 1..146 1..146 815 100 Plus
CG2157-PA 245 CG2157-PA 62..175 45..147 197 49.6 Plus
CG2157-PB 247 CG2157-PB 62..159 45..139 193 52 Plus
sqd-PD 178 CG16901-PD 67..160 47..141 190 49.5 Plus
CG14191-PA 193 CG14191-PA 37..138 47..148 189 48.1 Plus
CG2157-PB 247 CG2157-PB 133..234 46..148 165 41.7 Plus
CG2157-PA 245 CG2157-PA 131..239 46..122 148 40.4 Plus
sqd-PD 178 CG16901-PD 91..169 45..132 147 50 Plus
CG2157-PA 245 CG2157-PA 123..232 46..148 141 40.2 Plus