BO33994.complete Sequence
403 bp assembled on 2013-04-19
GenBank Submission: KX799665
> BO33994.complete
GAAGTTATCAGTCGACATGATGGTTTGGTTCAATTCCCTCTGCTTTCTGC
TGCTGCCGGCCTTGCTGATGGATTCGGTCATGACAACTGGCATCGACGAG
GATCATATCCTGAACCATGATGTGGACCCGGATCCGGGCCGCATGAAGTA
CATATGGAATCCGTTTTCGGGATTTTGCGGCGAGAATGCCACCATGGTGA
GGTGTGCTGGAGTTTGCCCCGAAACCTGTGCCTTCAAATCGCTCAAGTGT
CCCAAATATTGCGGTGTAAATTGCGTATGCAAACCTGACTATGTCTTTAA
CGAAAATCTGCAACTATGCATCCTTAAAACTGATTGTCCTCTAGACATAA
AGCAACTGGTTGTTGAAACTCATCGCGTTTTTCAGGCAAGCTTTCTAGAC
CAT
BO33994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34189-RA | 369 | CG34189-PA | 1..366 | 20..385 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34189-RA | 482 | CG34189-RA | 60..429 | 16..385 | 1850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16754503..16754872 | 16..385 | 1850 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:20:05 has no hits.
BO33994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:26:09 Download gff for
BO33994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34189-RA | 1..366 | 20..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:51 Download gff for
BO33994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34189-RA | 61..429 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:20 Download gff for
BO33994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34189-RA | 61..429 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:20 Download gff for
BO33994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16754504..16754872 | 17..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:51 Download gff for
BO33994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12642009..12642377 | 17..387 | 99 | | Plus |
BO33994.pep Sequence
Translation from 16 to 403
> BO33994.pep
MMVWFNSLCFLLLPALLMDSVMTTGIDEDHILNHDVDPDPGRMKYIWNPF
SGFCGENATMVRCAGVCPETCAFKSLKCPKYCGVNCVCKPDYVFNENLQL
CILKTDCPLDIKQLVVETHRVFQASFLDH
BO33994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34189-PA | 122 | CG34189-PA | 1..122 | 2..123 | 689 | 100 | Plus |
CG5267-PA | 178 | CG5267-PA | 99..177 | 44..122 | 193 | 48.1 | Plus |
Acp62F-PA | 115 | CG1262-PA | 34..92 | 54..111 | 170 | 47.5 | Plus |
CG33259-PA | 119 | CG33259-PA | 27..87 | 54..113 | 148 | 44.3 | Plus |