Clone BO33994 Report

Search the DGRC for BO33994

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG34189-RA
Protein status:BO33994.pep: Imported from assembly
Sequenced Size:403

Clone Sequence Records

BO33994.complete Sequence

403 bp assembled on 2013-04-19

GenBank Submission: KX799665

> BO33994.complete
GAAGTTATCAGTCGACATGATGGTTTGGTTCAATTCCCTCTGCTTTCTGC
TGCTGCCGGCCTTGCTGATGGATTCGGTCATGACAACTGGCATCGACGAG
GATCATATCCTGAACCATGATGTGGACCCGGATCCGGGCCGCATGAAGTA
CATATGGAATCCGTTTTCGGGATTTTGCGGCGAGAATGCCACCATGGTGA
GGTGTGCTGGAGTTTGCCCCGAAACCTGTGCCTTCAAATCGCTCAAGTGT
CCCAAATATTGCGGTGTAAATTGCGTATGCAAACCTGACTATGTCTTTAA
CGAAAATCTGCAACTATGCATCCTTAAAACTGATTGTCCTCTAGACATAA
AGCAACTGGTTGTTGAAACTCATCGCGTTTTTCAGGCAAGCTTTCTAGAC
CAT

BO33994.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG34189-RA 369 CG34189-PA 1..366 20..385 1830 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34189-RA 482 CG34189-RA 60..429 16..385 1850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16754503..16754872 16..385 1850 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:20:05 has no hits.

BO33994.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:26:09 Download gff for BO33994.complete
Subject Subject Range Query Range Percent Splice Strand
CG34189-RA 1..366 20..387 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:51 Download gff for BO33994.complete
Subject Subject Range Query Range Percent Splice Strand
CG34189-RA 61..429 17..387 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:20 Download gff for BO33994.complete
Subject Subject Range Query Range Percent Splice Strand
CG34189-RA 61..429 17..387 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:20 Download gff for BO33994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16754504..16754872 17..387 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:51 Download gff for BO33994.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12642009..12642377 17..387 99   Plus

BO33994.pep Sequence

Translation from 16 to 403

> BO33994.pep
MMVWFNSLCFLLLPALLMDSVMTTGIDEDHILNHDVDPDPGRMKYIWNPF
SGFCGENATMVRCAGVCPETCAFKSLKCPKYCGVNCVCKPDYVFNENLQL
CILKTDCPLDIKQLVVETHRVFQASFLDH

BO33994.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG34189-PA 122 CG34189-PA 1..122 2..123 689 100 Plus
CG5267-PA 178 CG5267-PA 99..177 44..122 193 48.1 Plus
Acp62F-PA 115 CG1262-PA 34..92 54..111 170 47.5 Plus
CG33259-PA 119 CG33259-PA 27..87 54..113 148 44.3 Plus