BO34005.complete Sequence
2716 bp assembled on 2013-10-14
GenBank Submission: KX795738
> BO34005.complete
GAAGTTATCAGTCGACATGAGTGGTCTGCCAATCTGGATACCGCTCCTTG
CACTTCTGGCCATAACTGCCGCCTGTCCGCCGGAGGTGTGTGTATGCAAA
TGGAAGGGGGGCAAGCAGACGGTGGAGTGCGGCGGCCAGCAGCTCTCCAA
TCTACCGGAGGGCATGGATCCGGGCACCCAGGTCCTCAACTTTAGCGGCA
ATGCGCTGCAGGTACTGCAATCGGAGCGGTTTCTACGTATGGATCTGCTA
AACCTGCAGAAGATTTATCTGTCACGGAATCAGTTGATCCGGATACACGA
GAAGGCCTTCAGGGGGCTGACGAATCTGGTCGAGCTGGATCTCAGCGAGA
ATGCGCTGCAGAATGTGCCAAGCGAAACGTTTCAGGACTACAGCTCTCTA
ATGCGCCTTTCGTTAAGTGGAAATCCTATCAGGGAGTTAAAGACATCCGC
CTTTCGGCACTTGTCTTTTCTCACGACACTAGAGCTGTCCAACTGCCAGG
TGGAGCGGATCGAGAATGAGGCCTTCGTGGGCATGGACAACCTGGAGTGG
CTGCGACTGGACGGCAATCGGATTGGGTTCATCCAGGGCACCCACATCCT
GCCCAAGTCGCTGCACGGCATCAGCCTGCACAGCAATCGGTGGAACTGCG
ACTGCCGCCTTCTAGACATCCACTTCTGGCTGGTCAACTATAACACGCCT
CTGGCGGAGGAACCCAAATGTATGGAACCGGCGAGGCTGAAAGGTCAGGT
GATCAAGAGCCTGCAGCGGGAGCAGCTGGCCTGTCTGCCGGAGGTTAGTC
CCCAGTCGAGTTATACGGAGGTGAGTGAGGGCAGGAACATGTCCATCACC
TGCCTGGTCAGGGCCATCCCGGAGCCGAAGGTCCTTTGGCTGTTCAATGG
CCAGGTGATGAGCAACGACAGCCTGATGGACAACCTGCACATGTACTACT
ATATCGACGAGACGATCGGAGTAAGCGGCGCCGAGGAGAAGCGCAGCGAG
ATCTTCATCTACAACGTTGGTGCCGAGGATAATGGCACCTTCTCCTGTGT
GGGCCAGAACATAGCTGGCACCACCTTCAGTAACTACACCCTGAGAGTCA
TAATCAAGGAGCCGCCGGTGGTGAATGAGGTCTCCTTCCCCAGGGATTAC
ATGAACTACATTGTGGCCAGCAGTGCCGGAGGCGGCATTATCTTCGTGGT
ACTCCTCTGCACCATAGTGGTCAAGTGCAAGAAGACCTCAGAGCCGGCCA
AGCAGCGCAAGAAGTGCGATCAGGTGACGAGTATTGCCGGTGGCACTGAC
TCCTCGACGGGGAGCACCCAGGACACGGGCATGGGCATGATGAAGTGCGC
CTCGATACTGAATGATGGCGGTGATAGTATGAACGGAAACCCAGGACTTC
TACTGGGCGATACCTTGACACCCACCAAGGCGGCGAATGGAGCAGCTGGC
GGTGGCATTATTTTGGGCAATCAGATGAAGCAGAACCTACTCCTCTACGC
CACTCCGAACTCCGCCCAGCAGCAGCTGCAGCTGAATGTCAACCTGATGG
GCACTGGACCGGGATCACCGCCGTTGCTCCTGAGCAATGGCCACGGCTTG
GCGGCAGCCTACTGCTCTCCTCCAGCTTCGCTGCGGAACTACCAAGAGAA
AAATCCGGACTTGGTCAACGATGCGGAGAGTGTCAAGCACAAGCTTAAGA
CGGCGGTAAGTCTGGACGGAGCCGGGGAGTACGAGACGCAGAGCGACTGT
GGTCAGTACGAGGGCTGCTATCAGCTGGCGGCCGCTCCACATCCGCATCA
GGGACACCAGCACCCTCATCCGGGACATCCGCTGATGGGACGTTTTGCCC
AGGCGATGACCACTTTGCCGCGCGGCATGCAACTGAAGCCGGCTCCCCAT
CAAGTTGATGTCCACCTGAATCCGGTGTGCTTCCTGGGCCAAGATGGATC
CTTCGCATACGATTACAGCAGTGCCCATATGGTGCAGCAGCCACCTCAGC
AACAGCAGCAGCAGCAACAGGTGCAGCCTGCCAATAACTTCTATCGCACG
TTGCCACACAATAGGTTGCACAAACAGCAGCAATTTCAGGCGGCTGCGGC
GGCAGGCGGAAATGTCGGTGTGGGTGGCAATCCCACACTGCGCTACAGCC
TCGAGGCCGAGTTCATCCAGAGGGGTCCGACGGTGAGCTACGAGAAGTAC
CAGCTGCCCAATGTGCGCTTCACAGCGGAGGGTTATCCTCAGCAGCAGCA
GCAGCAACAGCAGCAACTTCAGCAGCAGCAACAGTTGCAGCTCCAGCAGC
AGCATCAGTTCCCCTCACCGCCAGAGGGCTACAAAAGCGATTTGGCGGTG
ATGCCGGCGCCGTTTCAGCAATGGCCCAGCTGTTTGCCCGGCTACCGATT
CGCCCAGTCACCCACCAGCCTGCCAGCGGTTGCAACTCCACCACCAGCCG
CAGTGGTGGCAACACCACCACCGCCCACATCAGCAGTAAGCACACAATCC
ACGGCCACATCCACCATTCCGGAGCTGGATGAAAGCGAGGCGAGTTCGCC
GCGCCTCGAGGAAGCCGCCGGGTCTGCAGCGCCACCTGCCGGTGAGGAGG
AGAGTTCGGACACCGCAAAACTCAAACAGCTTAATGGCCCCTTGGCCGAC
AGTCCCGACGAGGGATACGTGGGCGATGGCCAGGAAACCAGCGACATTGC
AAGCTTTCTAGACCAT
BO34005.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek2-RA | 2685 | CG4977-PA | 1..2682 | 17..2698 | 13410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek2-RA | 6939 | CG4977-RA | 1875..4556 | 17..2698 | 13410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:06:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11621819..11624500 | 17..2698 | 13410 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2871 | 2240..2306 | 182 | 74.6 | Plus |
BO34005.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 10:07:59 Download gff for
BO34005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek2-RA | 1797..4478 | 17..2700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:24 Download gff for
BO34005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek2-RA | 1875..4556 | 17..2700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:24 Download gff for
BO34005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11621819..11624500 | 17..2700 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 10:07:59 Download gff for
BO34005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11621819..11624500 | 17..2700 | 99 | | Plus |
BO34005.pep Sequence
Translation from 16 to 2716
> BO34005.pep
MSGLPIWIPLLALLAITAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGM
DPGTQVLNFSGNALQVLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRG
LTNLVELDLSENALQNVPSETFQDYSSLMRLSLSGNPIRELKTSAFRHLS
FLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFIQGTHILPKSLH
GISLHSNRWNCDCRLLDIHFWLVNYNTPLAEEPKCMEPARLKGQVIKSLQ
REQLACLPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSN
DSLMDNLHMYYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIA
GTTFSNYTLRVIIKEPPVVNEVSFPRDYMNYIVASSAGGGIIFVVLLCTI
VVKCKKTSEPAKQRKKCDQVTSIAGGTDSSTGSTQDTGMGMMKCASILND
GGDSMNGNPGLLLGDTLTPTKAANGAAGGGIILGNQMKQNLLLYATPNSA
QQQLQLNVNLMGTGPGSPPLLLSNGHGLAAAYCSPPASLRNYQEKNPDLV
NDAESVKHKLKTAVSLDGAGEYETQSDCGQYEGCYQLAAAPHPHQGHQHP
HPGHPLMGRFAQAMTTLPRGMQLKPAPHQVDVHLNPVCFLGQDGSFAYDY
SSAHMVQQPPQQQQQQQQVQPANNFYRTLPHNRLHKQQQFQAAAAAGGNV
GVGGNPTLRYSLEAEFIQRGPTVSYEKYQLPNVRFTAEGYPQQQQQQQQQ
LQQQQQLQLQQQHQFPSPPEGYKSDLAVMPAPFQQWPSCLPGYRFAQSPT
SLPAVATPPPAAVVATPPPPTSAVSTQSTATSTIPELDESEASSPRLEEA
AGSAAPPAGEEESSDTAKLKQLNGPLADSPDEGYVGDGQETSDIASFLDH
BO34005.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek2-PA | 894 | CG4977-PA | 1..894 | 1..894 | 4711 | 100 | Plus |
| kek1-PC | 880 | CG12283-PC | 93..872 | 24..884 | 770 | 30.2 | Plus |
| kek1-PB | 880 | CG12283-PB | 93..872 | 24..884 | 770 | 30.2 | Plus |
| kek3-PB | 1021 | CG4192-PB | 75..519 | 16..450 | 636 | 34.3 | Plus |
| kek3-PA | 1021 | CG4192-PA | 75..519 | 16..450 | 636 | 34.3 | Plus |
