BO34026.complete Sequence
625 bp assembled on 2013-04-19
GenBank Submission: KX797140
> BO34026.complete
GAAGTTATCAGTCGACATGTCGTCGCGTACGAGCGGATATAGTAGTGGAG
TTCGCTCTCAACGTTATCCTGGTGGGCAGTACCAGGGCAAATGGTTGGGC
CAGCAGCCTCACGGGTTTGGGGTAAAGCAAACGAGCAGTGGACTTGTCTA
CGAGGGTCACTGGCAGAAGGGTCAACGGCATGGCATCGGAAGTTTGCGTC
GCAAGGAGCTCGATGGCCGCATGGAACGCATCTACGTGGGTCAGTGGCGG
GAGAACAAGCGGAGTGGCGAGGGCAAGCAGTTCTATCCGGACGGATCCGT
CTACTTTGGTCAGTGGCTAGCGGACCAGCGAAGTGGAGAGGGCATCCTAT
GGCAGGCGGATGGCGGCATCTATGTGGGCGAGTGGCTTCGGGACAAGATG
CACGAAAAGGGTTTACTTTTCACGGCAACGGGAAATCGCTACGTGGGTCA
ATTTGAAGGAGGCTGCAAATCGGGCTCAGGTGTATTTTACCATGCCAGCA
ATGGACAGCGGATTCAGCACGGTTTTTGGAGCAAGGACATCTGTAGAACG
TCACTACTGTCCCTGCCACAAGATAAAAACAATGAATTTATGTCAAAAGC
TCTTTTGGCAAGCTTTCTAGACCAT
BO34026.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-RA | 594 | CG14490-PA | 1..591 | 17..607 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-RA | 711 | CG14490-RA | 37..630 | 14..607 | 2970 | 100 | Plus |
| thr-RC | 4578 | CG5785-RC | 4341..4523 | 607..425 | 915 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17860796..17861207 | 14..425 | 2060 | 100 | Plus |
| 2R | 25286936 | 2R | 17861328..17861510 | 425..607 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:21:37 has no hits.
BO34026.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:46:36 Download gff for
BO34026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 1..591 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:35 Download gff for
BO34026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 40..630 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:52 Download gff for
BO34026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 40..630 | 17..609 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:52 Download gff for
BO34026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17860799..17861207 | 17..425 | 100 | -> | Plus |
| 2R | 17861329..17861510 | 426..609 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:35 Download gff for
BO34026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13748304..13748712 | 17..425 | 100 | -> | Plus |
| arm_2R | 13748834..13749015 | 426..609 | 98 | | Plus |
BO34026.pep Sequence
Translation from 16 to 625
> BO34026.pep
MSSRTSGYSSGVRSQRYPGGQYQGKWLGQQPHGFGVKQTSSGLVYEGHWQ
KGQRHGIGSLRRKELDGRMERIYVGQWRENKRSGEGKQFYPDGSVYFGQW
LADQRSGEGILWQADGGIYVGEWLRDKMHEKGLLFTATGNRYVGQFEGGC
KSGSGVFYHASNGQRIQHGFWSKDICRTSLLSLPQDKNNEFMSKALLASF
LDH
BO34026.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-PA | 197 | CG14490-PA | 1..197 | 1..197 | 1082 | 100 | Plus |
| CG30429-PA | 305 | CG30429-PA | 17..203 | 9..181 | 412 | 45 | Plus |
| CG5458-PA | 344 | CG5458-PA | 30..180 | 24..171 | 182 | 32.1 | Plus |
| CG5458-PA | 344 | CG5458-PA | 25..141 | 42..164 | 170 | 34.1 | Plus |
| jp-PE | 1054 | CG4405-PE | 77..194 | 19..137 | 162 | 34.7 | Plus |
| rtp-PA | 198 | CG10233-PA | 25..158 | 15..170 | 161 | 32.5 | Plus |
