BO34027.complete Sequence
742 bp assembled on 2013-04-19
GenBank Submission: KX795659
> BO34027.complete
GAAGTTATCAGTCGACATGTGCTCTGGCCAGAATGTAACGAAATCAAACA
ATAGCCAGGACATCATCACAGTGAAGGTCTTGCCGCAGTCAATATCTTCA
GATCCTTCAACTGGTTCTTCCAGCTCAACCACCGCCACACCCACAGCCAC
AACTCCCAAACTAAAATCCAATCCTACAGCCAAGTCCGCCATACAGGCTC
ACGAAATCGAGGAGGAGGACGACGACTTCCACAACGATCGTCTTCCCGCC
TTATCAGAGGATGAGTACAACAACCTGAGTGAGGACGCCAATCCGCTGCA
CTTCCTTAAGCAACAGCCCCTGGATCTTGAAAATGTGGAGCCGCAGCAGA
AGCCTGAATCTCAAACCGAGAGTAAGCCAGATCCGCAAGTGATGGCTCCA
CAAACCGCCGGCTCACCCATCTACATAACCATTCCCATTTACATAAGCAC
GGGCGGTAAGCTGCCCATTAGTTTGACCATTGGAGATCAGGATTTGTCAT
TGAAAAAGGAAAGCGGATCTGGATCCAGCAAGAAGAATCACTCTACCAAA
TCACCGAACTCGTTCTTCAATCGCTTGCTGCAGCAGATTGAGTCTCCCAA
GAGACGAACCACCAATCGCCATCGCAGCCAACTCAAGAGTCACGTATATG
CGATGAAGGAGATGGACAACCAGGGGAACAAGGATGGCAAGAAACTCAAG
ATTTTGCTTCATAGCCCAATGCAAGCAAGCTTTCTAGACCAT
BO34027.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14111-RB | 762 | CG14111-PB | 52..759 | 17..724 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14111-RB | 792 | CG14111-RB | 82..789 | 17..724 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13379992..13380377 | 339..724 | 1930 | 100 | Plus |
3L | 28110227 | 3L | 13379292..13379615 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:21:41 has no hits.
BO34027.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:47:41 Download gff for
BO34027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14111-RA | 1..708 | 17..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:38 Download gff for
BO34027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14111-RB | 52..759 | 17..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:53 Download gff for
BO34027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14111-RB | 82..789 | 17..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:53 Download gff for
BO34027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13379292..13379615 | 17..340 | 100 | -> | Plus |
3L | 13379994..13380377 | 341..726 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:38 Download gff for
BO34027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13372392..13372715 | 17..340 | 100 | -> | Plus |
arm_3L | 13373094..13373477 | 341..726 | 99 | | Plus |
BO34027.pep Sequence
Translation from 16 to 742
> BO34027.pep
MCSGQNVTKSNNSQDIITVKVLPQSISSDPSTGSSSSTTATPTATTPKLK
SNPTAKSAIQAHEIEEEDDDFHNDRLPALSEDEYNNLSEDANPLHFLKQQ
PLDLENVEPQQKPESQTESKPDPQVMAPQTAGSPIYITIPIYISTGGKLP
ISLTIGDQDLSLKKESGSGSSKKNHSTKSPNSFFNRLLQQIESPKRRTTN
RHRSQLKSHVYAMKEMDNQGNKDGKKLKILLHSPMQASFLDH
BO34027.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14111-PB | 253 | CG14111-PB | 18..253 | 1..236 | 1213 | 100 | Plus |