Clone BO34027 Report

Search the DGRC for BO34027

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:340
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG14111-RA
Protein status:BO34027.pep: Imported from assembly
Sequenced Size:742

Clone Sequence Records

BO34027.complete Sequence

742 bp assembled on 2013-04-19

GenBank Submission: KX795659

> BO34027.complete
GAAGTTATCAGTCGACATGTGCTCTGGCCAGAATGTAACGAAATCAAACA
ATAGCCAGGACATCATCACAGTGAAGGTCTTGCCGCAGTCAATATCTTCA
GATCCTTCAACTGGTTCTTCCAGCTCAACCACCGCCACACCCACAGCCAC
AACTCCCAAACTAAAATCCAATCCTACAGCCAAGTCCGCCATACAGGCTC
ACGAAATCGAGGAGGAGGACGACGACTTCCACAACGATCGTCTTCCCGCC
TTATCAGAGGATGAGTACAACAACCTGAGTGAGGACGCCAATCCGCTGCA
CTTCCTTAAGCAACAGCCCCTGGATCTTGAAAATGTGGAGCCGCAGCAGA
AGCCTGAATCTCAAACCGAGAGTAAGCCAGATCCGCAAGTGATGGCTCCA
CAAACCGCCGGCTCACCCATCTACATAACCATTCCCATTTACATAAGCAC
GGGCGGTAAGCTGCCCATTAGTTTGACCATTGGAGATCAGGATTTGTCAT
TGAAAAAGGAAAGCGGATCTGGATCCAGCAAGAAGAATCACTCTACCAAA
TCACCGAACTCGTTCTTCAATCGCTTGCTGCAGCAGATTGAGTCTCCCAA
GAGACGAACCACCAATCGCCATCGCAGCCAACTCAAGAGTCACGTATATG
CGATGAAGGAGATGGACAACCAGGGGAACAAGGATGGCAAGAAACTCAAG
ATTTTGCTTCATAGCCCAATGCAAGCAAGCTTTCTAGACCAT

BO34027.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14111-RB 762 CG14111-PB 52..759 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14111-RB 792 CG14111-RB 82..789 17..724 3540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13379992..13380377 339..724 1930 100 Plus
3L 28110227 3L 13379292..13379615 17..340 1620 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:21:41 has no hits.

BO34027.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:47:41 Download gff for BO34027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14111-RA 1..708 17..726 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:38 Download gff for BO34027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14111-RB 52..759 17..726 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:53 Download gff for BO34027.complete
Subject Subject Range Query Range Percent Splice Strand
CG14111-RB 82..789 17..726 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:53 Download gff for BO34027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13379292..13379615 17..340 100 -> Plus
3L 13379994..13380377 341..726 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:38 Download gff for BO34027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13372392..13372715 17..340 100 -> Plus
arm_3L 13373094..13373477 341..726 99   Plus

BO34027.pep Sequence

Translation from 16 to 742

> BO34027.pep
MCSGQNVTKSNNSQDIITVKVLPQSISSDPSTGSSSSTTATPTATTPKLK
SNPTAKSAIQAHEIEEEDDDFHNDRLPALSEDEYNNLSEDANPLHFLKQQ
PLDLENVEPQQKPESQTESKPDPQVMAPQTAGSPIYITIPIYISTGGKLP
ISLTIGDQDLSLKKESGSGSSKKNHSTKSPNSFFNRLLQQIESPKRRTTN
RHRSQLKSHVYAMKEMDNQGNKDGKKLKILLHSPMQASFLDH

BO34027.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14111-PB 253 CG14111-PB 18..253 1..236 1213 100 Plus