BO34028.complete Sequence
802 bp assembled on 2013-04-19
GenBank Submission: KX794127
> BO34028.complete
GAAGTTATCAGTCGACATGGAGTCGTTCTCAGCGTCCAGGTGCTCCACCA
TACCGTCACCACTGCCGCACAGTGCCAGTGGCATGGACAGTCCGGATATC
TGTGAGCCGCCGCAGGATGAGCAGGAGTTCTGCTTTCGCTATCCCAGCTA
CATGTTTCCGGACGTGGAGTACGACAAGGAGGATGTGCCGCTACCCTTCA
AGGCCTCGCCGGACTCGCTCTTCAATCTCTGCGCCGCCGTCGTGGATTCC
CAAGCCCGCACTGAGGTCTTCAAGTGGAGCATCAACGATGTGACCGACTG
GCTGCGCAACTTTGGTTATCCCGAGTACGAGCAAACTTTTCGGGAGAACT
ACATTGATGGACACAAGCTGCTGAATCTGGACGCAGTTGCTCTGGTTGCG
CTCAACGTTCGCAACTTCGAGCACATCCGCCACCTGGGCCGCGGCATACG
AGCGCTTTACAGGAAGGAGCTGCAAACGGCGACGGAGACCAAGCAGCAGA
GTGAGGTCTATAAGACATTCCGGGCCCGCACTGGCCGAAGGTACGAGGGA
TTGCGGGAGACGGAGCTACTGGGCCGCATGCACATGATTCGCTCCGTTTT
CCGCGACGTCAACGACTGGGATCTGATGGAGCTGCACATGTCCAGGGCGC
CGGTGAGGCGGTATCGCGAGATCGTCGCTGGCTCCAGACGCTACAACCTC
TATGGCCCATCGACAGCGCGCCGGGAACCCATCATTACGGACGATGTGGA
TGCCACACCGTGGTACAACTTCGAGGATTGCTACGCAAGCTTTCTAGACC
AT
BO34028.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13996-RA | 771 | CG13996-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13996-RA | 832 | CG13996-RA | 16..783 | 17..784 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6021215..6021669 | 330..784 | 2275 | 100 | Plus |
2L | 23513712 | 2L | 6020850..6021164 | 17..331 | 1575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:21:45 has no hits.
BO34028.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:49:42 Download gff for
BO34028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13996-RA | 1..768 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:40 Download gff for
BO34028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13996-RA | 16..783 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:55 Download gff for
BO34028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13996-RA | 16..783 | 17..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:55 Download gff for
BO34028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6021217..6021669 | 332..786 | 99 | | Plus |
2L | 6020850..6021164 | 17..331 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:40 Download gff for
BO34028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6020850..6021164 | 17..331 | 100 | -> | Plus |
arm_2L | 6021217..6021669 | 332..786 | 99 | | Plus |
BO34028.pep Sequence
Translation from 16 to 802
> BO34028.pep
MESFSASRCSTIPSPLPHSASGMDSPDICEPPQDEQEFCFRYPSYMFPDV
EYDKEDVPLPFKASPDSLFNLCAAVVDSQARTEVFKWSINDVTDWLRNFG
YPEYEQTFRENYIDGHKLLNLDAVALVALNVRNFEHIRHLGRGIRALYRK
ELQTATETKQQSEVYKTFRARTGRRYEGLRETELLGRMHMIRSVFRDVND
WDLMELHMSRAPVRRYREIVAGSRRYNLYGPSTARREPIITDDVDATPWY
NFEDCYASFLDH
BO34028.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13996-PA | 256 | CG13996-PA | 1..256 | 1..256 | 1376 | 100 | Plus |
CG15625-PA | 349 | CG15625-PA | 43..242 | 51..245 | 389 | 37 | Plus |