Clone BO34028 Report

Search the DGRC for BO34028

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:340
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG13996-RA
Protein status:BO34028.pep: Imported from assembly
Sequenced Size:802

Clone Sequence Records

BO34028.complete Sequence

802 bp assembled on 2013-04-19

GenBank Submission: KX794127

> BO34028.complete
GAAGTTATCAGTCGACATGGAGTCGTTCTCAGCGTCCAGGTGCTCCACCA
TACCGTCACCACTGCCGCACAGTGCCAGTGGCATGGACAGTCCGGATATC
TGTGAGCCGCCGCAGGATGAGCAGGAGTTCTGCTTTCGCTATCCCAGCTA
CATGTTTCCGGACGTGGAGTACGACAAGGAGGATGTGCCGCTACCCTTCA
AGGCCTCGCCGGACTCGCTCTTCAATCTCTGCGCCGCCGTCGTGGATTCC
CAAGCCCGCACTGAGGTCTTCAAGTGGAGCATCAACGATGTGACCGACTG
GCTGCGCAACTTTGGTTATCCCGAGTACGAGCAAACTTTTCGGGAGAACT
ACATTGATGGACACAAGCTGCTGAATCTGGACGCAGTTGCTCTGGTTGCG
CTCAACGTTCGCAACTTCGAGCACATCCGCCACCTGGGCCGCGGCATACG
AGCGCTTTACAGGAAGGAGCTGCAAACGGCGACGGAGACCAAGCAGCAGA
GTGAGGTCTATAAGACATTCCGGGCCCGCACTGGCCGAAGGTACGAGGGA
TTGCGGGAGACGGAGCTACTGGGCCGCATGCACATGATTCGCTCCGTTTT
CCGCGACGTCAACGACTGGGATCTGATGGAGCTGCACATGTCCAGGGCGC
CGGTGAGGCGGTATCGCGAGATCGTCGCTGGCTCCAGACGCTACAACCTC
TATGGCCCATCGACAGCGCGCCGGGAACCCATCATTACGGACGATGTGGA
TGCCACACCGTGGTACAACTTCGAGGATTGCTACGCAAGCTTTCTAGACC
AT

BO34028.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-RA 771 CG13996-PA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-RA 832 CG13996-RA 16..783 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6021215..6021669 330..784 2275 100 Plus
2L 23513712 2L 6020850..6021164 17..331 1575 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:21:45 has no hits.

BO34028.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:49:42 Download gff for BO34028.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 1..768 17..786 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:40 Download gff for BO34028.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 16..783 17..786 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:55 Download gff for BO34028.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 16..783 17..786 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:55 Download gff for BO34028.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6021217..6021669 332..786 99   Plus
2L 6020850..6021164 17..331 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:40 Download gff for BO34028.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6020850..6021164 17..331 100 -> Plus
arm_2L 6021217..6021669 332..786 99   Plus

BO34028.pep Sequence

Translation from 16 to 802

> BO34028.pep
MESFSASRCSTIPSPLPHSASGMDSPDICEPPQDEQEFCFRYPSYMFPDV
EYDKEDVPLPFKASPDSLFNLCAAVVDSQARTEVFKWSINDVTDWLRNFG
YPEYEQTFRENYIDGHKLLNLDAVALVALNVRNFEHIRHLGRGIRALYRK
ELQTATETKQQSEVYKTFRARTGRRYEGLRETELLGRMHMIRSVFRDVND
WDLMELHMSRAPVRRYREIVAGSRRYNLYGPSTARREPIITDDVDATPWY
NFEDCYASFLDH

BO34028.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-PA 256 CG13996-PA 1..256 1..256 1376 100 Plus
CG15625-PA 349 CG15625-PA 43..242 51..245 389 37 Plus