BO34029.complete Sequence
1024 bp assembled on 2013-04-19
GenBank Submission: KX797711
> BO34029.complete
GAAGTTATCAGTCGACATGTACGGCCAAGGATTACGTTTTCTTCTCGCCC
AGCTTGTTTTGGTGCTCCTTTTGTCCAATGCCTTGGGTCGCCTGCACAAG
AGGAATGGCTATCACTACCGACCGCAGCAACCGCCACCAATCCACCAAGG
TGGTTACTTTGAGCCCCATCTGCCGGCAGTAGAGCCTCCCGAGCCAGAGA
AGCCACAACATAGCACCAAAAGCTACTACACCACATCGGGAGGTAGCTCC
TCAGTTTCCAGCAAGGGATCCGGTGGCTATAGCATTGGCAGCGGCCTGCG
TTCCATTGCCCAGGGATCGGCGGATCAGGCTCACAGTGCAGTGACCAACC
AGCATGCAGCTGCCAAGCAGGCGGCCTATATAGCCCAGAATACACTGGCC
CAAGCGGCTTCTCAGGCGGCGGCCACTGCACAAGCGGCTCTGGTGGGCAA
GCAGGTTGTTCTCCAGGAGTTGGAGCAGCAGGCAGCCGAGGCCCAAAGAT
CTCTGTCCCGTGAGCTAGAGCAACTGAAGGCGGCCAAGATCTCCGCGAGA
TTGGCACAGCAAACGGCACAAGCGGCGCATCATCACATATCCGTGCTCAC
AGCTGCGGTAAATAATGCCAAATCCGTGGCCGAACAGGCTGAGCAAACCT
CCACGGAGGTGAACAATCAACTGGCCTCCCAATCCCAGATGGTGGGTCAG
TCCAAGAACCGATTAGAGCAGGTTGAGGAGCAGTTGCACCAGGCGCGCGT
AGACTATGCGGCCACCAAGGAGTCCGCCCTTAAGGCGGCCAATTCCGCAG
CTGCGGCTCAGGTGAATGCATCCAAGGCGGCCCAGCATGCCACGATCGGA
TTGCATGAGAGCACGAATCCATCAGCCCACGGGCACGATGGTCAGGAGTT
GGGTGGCGAGGAGGAGTCCTACGATGAGCACCTAGACACCAGTGGCGGGG
AAGTGGGACACACTGGCGGAGGAGAGGAACTATCCGAACATATTCGAGCT
CCATATGCAAGCTTTCTAGACCAT
BO34029.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33257-RA | 993 | CG33257-PA | 1..990 | 17..1006 | 4950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33257-RA | 993 | CG33257-RA | 1..990 | 17..1006 | 4950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16346669..16347617 | 58..1006 | 4730 | 99.9 | Plus |
| 3L | 28110227 | 3L | 16346319..16346368 | 13..62 | 235 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:21:50 has no hits.
BO34029.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:50:24 Download gff for
BO34029.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33257-RA | 1..990 | 17..1008 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:42 Download gff for
BO34029.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33257-RA | 1..990 | 17..1008 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:57 Download gff for
BO34029.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33257-RA | 1..990 | 17..1008 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:57 Download gff for
BO34029.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16346323..16346368 | 17..62 | 100 | -> | Plus |
| 3L | 16346674..16347617 | 63..1008 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:42 Download gff for
BO34029.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16339423..16339468 | 17..62 | 100 | -> | Plus |
| arm_3L | 16339774..16340717 | 63..1008 | 99 | | Plus |
BO34029.pep Sequence
Translation from 16 to 1024
> BO34029.pep
MYGQGLRFLLAQLVLVLLLSNALGRLHKRNGYHYRPQQPPPIHQGGYFEP
HLPAVEPPEPEKPQHSTKSYYTTSGGSSSVSSKGSGGYSIGSGLRSIAQG
SADQAHSAVTNQHAAAKQAAYIAQNTLAQAASQAAATAQAALVGKQVVLQ
ELEQQAAEAQRSLSRELEQLKAAKISARLAQQTAQAAHHHISVLTAAVNN
AKSVAEQAEQTSTEVNNQLASQSQMVGQSKNRLEQVEEQLHQARVDYAAT
KESALKAANSAAAAQVNASKAAQHATIGLHESTNPSAHGHDGQELGGEEE
SYDEHLDTSGGEVGHTGGGEELSEHIRAPYASFLDH
BO34029.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33257-PA | 330 | CG33257-PA | 1..330 | 1..330 | 1655 | 100 | Plus |
| CG11693-PB | 323 | CG11693-PB | 7..322 | 10..306 | 526 | 43.5 | Plus |
| CG11693-PA | 318 | CG11693-PA | 16..317 | 24..306 | 519 | 44.2 | Plus |
| CG14840-PA | 300 | CG14840-PA | 7..265 | 13..271 | 263 | 30.1 | Plus |
| CG11694-PA | 261 | CG11694-PA | 41..249 | 76..277 | 235 | 31.6 | Plus |
