Clone BO34033 Report

Search the DGRC for BO34033

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:340
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG18094-RA
Protein status:BO34033.pep: Imported from assembly
Sequenced Size:1114

Clone Sequence Records

BO34033.complete Sequence

1114 bp assembled on 2013-04-19

GenBank Submission: KX798367

> BO34033.complete
GAAGTTATCAGTCGACATGACTACTAAAACTGGAACTTATAGACCTTCGG
CTAGCCTTATTGTAGCCGCCAAAGAGGATTCTTTAGAGGACTACGACTAC
AGATTATTGTTGATTAAACGAACTGAAAAAACTTCCTATGCATTGAACCA
TTGCGTCTTTCCTGGCGGCGTCTTCGATCCTATAGAAGATCAATCTGCGA
AATGGATAACTTTTTTCAAATCCTTTGGGGTGACCGATGAACAATTAAAA
ATGTGTAGGCACAATCAGGATTCTCCAAGGCCTGAGTTTCTATCCGGTGG
AGACCATATTTCAAGGGACATTGCACTGCGACTGACTGCGCTCAGGGAAA
CCTTTGAAGAGGTGGGCATCTTGATTTGCACAGAACAGGACGACATACAA
AAATGGGATTCTAAATCGGGTCATCCTAGAACCGTGCTTCTCGAGTCAAG
CGAACACTTCGAATGGCAACATCGGGTTCACAATGATGCCTCACAGTTTC
TGGAACTCTTTCGGCATTATAAAGTCATTCCCAATATCTGGTCTCTTCAG
GAATGGTCCATTTGGAGGACAGCAGCCACTGCCAATCGGAAATATGACAC
TGTTTATTATATCACCATGTTAGATAAGTACACCAGGAATATAAAGCTGC
TTCTGGAACCGCACGAGGTGGCTTCGGCCCACTGGTTGAGTCCGATCGAG
GCTTGGTCGAGCTCACAGAAAGCCATTATTTGGCTCCCGTTCATGCTGCT
CTATGACATCGCTCGTCTGATGAACTTCTATAGCTTTCAGGAGCTTCTCA
ACTTCTCCCGCCAAAGGAGCTGCAATGGAAGCACAATGGTGCAGCCCGTC
TACTATCGCTGCGATGACTGCATGTTTGGAGTTCTTCCTGGTGATGAGCT
CTATCCCAAAGAACCAGGCGCTTGTACACAAACAATTATCTTGTCGGGAT
CGGTGGACGACCTTCATCGAAAGTCCAAGCAATACAATCGCTATATCGTC
TACGACTTCCACAAGGTCGTACTGGCCTCCAATATACCGCCCTGCGATGG
GCATCTGCCACTGCAGCCTCTTGTCAATAACAAGCTAGCCAAGTTGGCAA
GCTTTCTAGACCAT

BO34033.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG18094-RB 1083 CG18094-PB 1..1080 17..1096 5400 100 Plus
CG18094-RA 1083 CG18094-PA 1..1080 17..1096 5400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG18094-RB 1357 CG18094-RB 225..1304 17..1096 5400 100 Plus
CG18094-RA 1196 CG18094-RA 64..1143 17..1096 5400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19490634..19491626 104..1096 4965 100 Plus
2L 23513712 2L 19490486..19490576 17..107 440 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 13:21:54 has no hits.

BO34033.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:51:37 Download gff for BO34033.complete
Subject Subject Range Query Range Percent Splice Strand
CG18094-RA 1..1080 17..1098 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:45 Download gff for BO34033.complete
Subject Subject Range Query Range Percent Splice Strand
CG18094-RA 64..1143 17..1098 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:59 Download gff for BO34033.complete
Subject Subject Range Query Range Percent Splice Strand
CG18094-RA 64..1143 17..1098 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:59 Download gff for BO34033.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19490486..19490572 17..103 100 -> Plus
2L 19490634..19491626 104..1098 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:45 Download gff for BO34033.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19490486..19490572 17..103 100 -> Plus
arm_2L 19490634..19491626 104..1098 99   Plus

BO34033.pep Sequence

Translation from 16 to 1114

> BO34033.pep
MTTKTGTYRPSASLIVAAKEDSLEDYDYRLLLIKRTEKTSYALNHCVFPG
GVFDPIEDQSAKWITFFKSFGVTDEQLKMCRHNQDSPRPEFLSGGDHISR
DIALRLTALRETFEEVGILICTEQDDIQKWDSKSGHPRTVLLESSEHFEW
QHRVHNDASQFLELFRHYKVIPNIWSLQEWSIWRTAATANRKYDTVYYIT
MLDKYTRNIKLLLEPHEVASAHWLSPIEAWSSSQKAIIWLPFMLLYDIAR
LMNFYSFQELLNFSRQRSCNGSTMVQPVYYRCDDCMFGVLPGDELYPKEP
GACTQTIILSGSVDDLHRKSKQYNRYIVYDFHKVVLASNIPPCDGHLPLQ
PLVNNKLAKLASFLDH

BO34033.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG18094-PB 360 CG18094-PB 1..360 1..360 1935 100 Plus
CG18094-PA 360 CG18094-PA 1..360 1..360 1935 100 Plus
CG10195-PB 361 CG10195-PB 10..349 8..347 540 35.3 Plus
CG10195-PC 361 CG10195-PC 10..349 8..347 540 35.3 Plus
CG10194-PA 351 CG10194-PA 9..348 9..351 537 34.9 Plus