Clone BO34071 Report

Search the DGRC for BO34071

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:340
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptAld-RH
Protein status:BO34071.pep: Imported from assembly
Sequenced Size:1123

Clone Sequence Records

BO34071.complete Sequence

1123 bp assembled on 2013-04-19

GenBank Submission: KX799788

> BO34071.complete
GAAGTTATCAGTCGACATGACGACCTACTTCAACTACCCCAGCAAGGAGC
TGCAGGATGAGCTGCGCGAAATCGCCCAGAAAATCGTTGCCCCCGGCAAG
GGAATCCTCGCCGCCGATGAGTCCGGCCCAACCATGGGCAAGCGTCTGCA
GGACATCGGCGTGGAGAACACCGAGGACAACCGCCGTGCCTACCGTCAGC
TGTTGTTCAGCACTGACCCCAAGCTGGCCGAGAACATCTCTGGAGTGATC
CTGTTCCACGAGACCCTCTACCAGAAGGCCGATGATGGCACCCCCTTCGC
CGAGATCCTGAAGAAGAAGGGAATCATTCTGGGCATCAAGGTCGACAAGG
GTGTTGTCCCACTGTTCGGCTCTGAGGATGAGGTCACCACCCAGGGTCTG
GATGACCTGGCCGCCCGTTGCGCCCAGTACAAGAAGGACGGTTGCGACTT
CGCCAAGTGGCGTTGCGTCCTGAAGATCGGCAAGAACACCCCATCCTACC
AGTCGATCCTGGAGAACGCCAATGTCCTGGCCCGCTACGCCTCCATCTGC
CAGTCGCAGCGCATCGTCCCAATTGTGGAGCCCGAGGTTCTGCCCGATGG
CGATCACGATCTGGACCGCGCCCAGAAGGTCACCGAGACCGTCCTGGCCG
CCGTCTACAAGGCCCTGAGCGACCACCACGTCTACCTGGAGGGTACTCTG
CTGAAGCCCAACATGGTCACCGCCGGTCAGTCGGCCAAGAAGAACACCCC
CGAGGAGATCGCCCTGGCCACCGTGCAGGCTCTGCGCCGCACCGTTCCCG
CCGCCGTTACTGGCGTGACCTTCCTGTCTGGAGGTCAGTCCGAGGAGGAG
GCCACCGTCAACCTGAGTGCCATCAACAACGTTCCCTTGATCCGCCCATG
GGCCCTCACCTTCTCGTACGGTCGTGCCCTGCAGGCCTCCGTCCTGCGTG
CCTGGGCTGGCAAGAAGGAGAACATTGCTGCCGGCCAGAACGAGCTGCTT
AAGCGCGCCAAGGCCAATTCCCAGGCCTGTCAGGGTATTTACGTGCCCGG
CTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCTTTGTCGCCCAGCACA
AATACGCAAGCTTTCTAGACCAT

BO34071.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:04
Subject Length Description Subject Range Query Range Score Percent Strand
Ald-RJ 1092 CG6058-PJ 1..1089 17..1105 5445 100 Plus
Ald-RL 1092 CG6058-PL 1..1089 17..1105 5445 100 Plus
Ald-RH 1092 CG6058-PH 1..1089 17..1105 5445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:05
Subject Length Description Subject Range Query Range Score Percent Strand
Ald-RJ 1614 CG6058-RJ 277..1365 17..1105 5445 100 Plus
Ald-RL 1615 CG6058-RL 278..1366 17..1105 5445 100 Plus
Ald-RH 1618 CG6058-RH 281..1369 17..1105 5445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26257224..26258020 813..17 3985 100 Minus
3R 32079331 3R 26256932..26257137 1013..808 1015 99.5 Minus
3R 32079331 3R 26414213..26414832 98..717 505 72.1 Plus
3R 32079331 3R 26256215..26256309 1105..1011 475 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:21:03 has no hits.

BO34071.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:39:32 Download gff for BO34071.complete
Subject Subject Range Query Range Percent Splice Strand
Ald-RH 193..1281 17..1107 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:19 Download gff for BO34071.complete
Subject Subject Range Query Range Percent Splice Strand
Ald-RH 281..1369 17..1107 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:41 Download gff for BO34071.complete
Subject Subject Range Query Range Percent Splice Strand
Ald-RH 281..1369 17..1107 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:41 Download gff for BO34071.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26256213..26256307 1013..1107 97 <- Minus
3R 26256933..26257132 813..1012 100 <- Minus
3R 26257225..26258020 17..812 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:19 Download gff for BO34071.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22081935..22082029 1013..1107 97 <- Minus
arm_3R 22082655..22082854 813..1012 100 <- Minus
arm_3R 22082947..22083742 17..812 100   Minus

BO34071.pep Sequence

Translation from 16 to 1123

> BO34071.pep
MTTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVE
NTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKK
KGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRC
VLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLD
RAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIAL
ATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFS
YGRALQASVLRAWAGKKENIAAGQNELLKRAKANSQACQGIYVPGSIPSF
AGNANLFVAQHKYASFLDH

BO34071.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
Ald-PJ 363 CG6058-PJ 1..363 1..363 1855 100 Plus
Ald-PL 363 CG6058-PL 1..363 1..363 1855 100 Plus
Ald-PH 363 CG6058-PH 1..363 1..363 1855 100 Plus
Ald-PM 361 CG6058-PM 1..361 1..363 1761 96.1 Plus
Ald-PK 361 CG6058-PK 1..361 1..363 1761 96.1 Plus