BO34071.complete Sequence
1123 bp assembled on 2013-04-19
GenBank Submission: KX799788
> BO34071.complete
GAAGTTATCAGTCGACATGACGACCTACTTCAACTACCCCAGCAAGGAGC
TGCAGGATGAGCTGCGCGAAATCGCCCAGAAAATCGTTGCCCCCGGCAAG
GGAATCCTCGCCGCCGATGAGTCCGGCCCAACCATGGGCAAGCGTCTGCA
GGACATCGGCGTGGAGAACACCGAGGACAACCGCCGTGCCTACCGTCAGC
TGTTGTTCAGCACTGACCCCAAGCTGGCCGAGAACATCTCTGGAGTGATC
CTGTTCCACGAGACCCTCTACCAGAAGGCCGATGATGGCACCCCCTTCGC
CGAGATCCTGAAGAAGAAGGGAATCATTCTGGGCATCAAGGTCGACAAGG
GTGTTGTCCCACTGTTCGGCTCTGAGGATGAGGTCACCACCCAGGGTCTG
GATGACCTGGCCGCCCGTTGCGCCCAGTACAAGAAGGACGGTTGCGACTT
CGCCAAGTGGCGTTGCGTCCTGAAGATCGGCAAGAACACCCCATCCTACC
AGTCGATCCTGGAGAACGCCAATGTCCTGGCCCGCTACGCCTCCATCTGC
CAGTCGCAGCGCATCGTCCCAATTGTGGAGCCCGAGGTTCTGCCCGATGG
CGATCACGATCTGGACCGCGCCCAGAAGGTCACCGAGACCGTCCTGGCCG
CCGTCTACAAGGCCCTGAGCGACCACCACGTCTACCTGGAGGGTACTCTG
CTGAAGCCCAACATGGTCACCGCCGGTCAGTCGGCCAAGAAGAACACCCC
CGAGGAGATCGCCCTGGCCACCGTGCAGGCTCTGCGCCGCACCGTTCCCG
CCGCCGTTACTGGCGTGACCTTCCTGTCTGGAGGTCAGTCCGAGGAGGAG
GCCACCGTCAACCTGAGTGCCATCAACAACGTTCCCTTGATCCGCCCATG
GGCCCTCACCTTCTCGTACGGTCGTGCCCTGCAGGCCTCCGTCCTGCGTG
CCTGGGCTGGCAAGAAGGAGAACATTGCTGCCGGCCAGAACGAGCTGCTT
AAGCGCGCCAAGGCCAATTCCCAGGCCTGTCAGGGTATTTACGTGCCCGG
CTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCTTTGTCGCCCAGCACA
AATACGCAAGCTTTCTAGACCAT
BO34071.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ald-RJ | 1092 | CG6058-PJ | 1..1089 | 17..1105 | 5445 | 100 | Plus |
Ald-RL | 1092 | CG6058-PL | 1..1089 | 17..1105 | 5445 | 100 | Plus |
Ald-RH | 1092 | CG6058-PH | 1..1089 | 17..1105 | 5445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ald-RJ | 1614 | CG6058-RJ | 277..1365 | 17..1105 | 5445 | 100 | Plus |
Ald-RL | 1615 | CG6058-RL | 278..1366 | 17..1105 | 5445 | 100 | Plus |
Ald-RH | 1618 | CG6058-RH | 281..1369 | 17..1105 | 5445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26257224..26258020 | 813..17 | 3985 | 100 | Minus |
3R | 32079331 | 3R | 26256932..26257137 | 1013..808 | 1015 | 99.5 | Minus |
3R | 32079331 | 3R | 26414213..26414832 | 98..717 | 505 | 72.1 | Plus |
3R | 32079331 | 3R | 26256215..26256309 | 1105..1011 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:21:03 has no hits.
BO34071.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:39:32 Download gff for
BO34071.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ald-RH | 193..1281 | 17..1107 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:19 Download gff for
BO34071.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ald-RH | 281..1369 | 17..1107 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:41 Download gff for
BO34071.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ald-RH | 281..1369 | 17..1107 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:41 Download gff for
BO34071.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26256213..26256307 | 1013..1107 | 97 | <- | Minus |
3R | 26256933..26257132 | 813..1012 | 100 | <- | Minus |
3R | 26257225..26258020 | 17..812 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:19 Download gff for
BO34071.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22081935..22082029 | 1013..1107 | 97 | <- | Minus |
arm_3R | 22082655..22082854 | 813..1012 | 100 | <- | Minus |
arm_3R | 22082947..22083742 | 17..812 | 100 | | Minus |
BO34071.pep Sequence
Translation from 16 to 1123
> BO34071.pep
MTTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVE
NTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKK
KGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRC
VLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLD
RAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIAL
ATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFS
YGRALQASVLRAWAGKKENIAAGQNELLKRAKANSQACQGIYVPGSIPSF
AGNANLFVAQHKYASFLDH
BO34071.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ald-PJ | 363 | CG6058-PJ | 1..363 | 1..363 | 1855 | 100 | Plus |
Ald-PL | 363 | CG6058-PL | 1..363 | 1..363 | 1855 | 100 | Plus |
Ald-PH | 363 | CG6058-PH | 1..363 | 1..363 | 1855 | 100 | Plus |
Ald-PM | 361 | CG6058-PM | 1..361 | 1..363 | 1761 | 96.1 | Plus |
Ald-PK | 361 | CG6058-PK | 1..361 | 1..363 | 1761 | 96.1 | Plus |