BO34076.complete Sequence
763 bp assembled on 2013-04-19
GenBank Submission: KX794878
> BO34076.complete
GAAGTTATCAGTCGACATGCCATCGCCCAAGAAAAGAAGTGTGGATAAAG
CGGATGGCAAGAAGGGCAAGGGTCAAGGAGCAGGCGGCGTGAAGGGATGC
TGCTGCAAGCGGTCGCAGTGCATCAAGAACTACTGCGACTGCTATCAGTC
CATGGCCATCTGCACCAAGTTCTGTCGATGCGTTGGCTGCAGGAACACAG
AGGTGCGCGAGTTGGTGGACCCCAACTCCGTGGCCAAGAATTCCAGCGCT
GTGAAAAGGCAGAAGGCGGCTGCGATGAGCGCCAAGGCAGCAGCCGCAGC
TGCCAAGGCGGGCATCGATGTCCAGGGCAAGGCGCTCCAGGTGGCGGCAT
CCACTTTGGCGTTGCCCGGCAAGGCGCTAATGACGCCGCCAAAGTATACC
CTAGTGGCTGGCAAACCACCGATGGCTAGTAGTCACATTAACCCCATACC
CATCTCACGACCCATAGCGACTGCCGCCACTCCAGCCAGGGCGGTGAAGC
AACCGGCGGAACCTCCGATGCCCGTCAATCTGATCATTCCGGTGCGGCAC
GACGATCGCAGGGATCGGAATCTCTTCGTGCAGCCGGTGAACGCGGCTCT
GCTGGAGTGCATGCTCATCCAGGCCACGGAAGCCGAACAGTTGGGCCTGA
ACGAGCTCCAAGTGTGCCAGCTGGTGCTCGAAGAGTTTATGCGCGGCTAC
AAGAACATTTTGGAGAAAATATGCGAGTACAGCAAGGATTATTATGCAAG
CTTTCTAGACCAT
BO34076.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-RA | 732 | CG14016-PA | 1..729 | 17..745 | 3630 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-RA | 836 | CG14016-RA | 31..761 | 15..745 | 3640 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5535936..5536496 | 745..185 | 2790 | 99.8 | Minus |
| 2L | 23513712 | 2L | 5536557..5536728 | 186..15 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:21:24 has no hits.
BO34076.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:43:41 Download gff for
BO34076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 1..729 | 17..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:30 Download gff for
BO34076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 33..761 | 17..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:47 Download gff for
BO34076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 33..761 | 17..747 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:47 Download gff for
BO34076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5535934..5536495 | 186..747 | 99 | <- | Minus |
| 2L | 5536558..5536726 | 17..185 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:30 Download gff for
BO34076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5535934..5536495 | 186..747 | 99 | <- | Minus |
| arm_2L | 5536558..5536726 | 17..185 | 100 | | Minus |
BO34076.pep Sequence
Translation from 16 to 763
> BO34076.pep
MPSPKKRSVDKADGKKGKGQGAGGVKGCCCKRSQCIKNYCDCYQSMAICT
KFCRCVGCRNTEVRELVDPNSVAKNSSAVKRQKAAAMSAKAAAAAAKAGI
DVQGKALQVAASTLALPGKALMTPPKYTLVAGKPPMASSHINPIPISRPI
ATAATPARAVKQPAEPPMPVNLIIPVRHDDRRDRNLFVQPVNAALLECML
IQATEAEQLGLNELQVCQLVLEEFMRGYKNILEKICEYSKDYYASFLDH
BO34076.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-PA | 243 | CG14016-PA | 1..243 | 1..243 | 1267 | 100 | Plus |
| mip120-PA | 950 | CG6061-PA | 812..858 | 26..72 | 167 | 57.4 | Plus |
| mip120-PB | 952 | CG6061-PB | 814..860 | 26..72 | 167 | 57.4 | Plus |
