BO34082.complete Sequence
411 bp assembled on 2013-04-19
GenBank Submission: KX797439
> BO34082.complete
GAAGTTATCAGTCGACATGAAGACAGTCATTCTATTTGGCTTCCTGCTGG
CACTTCTTGGATATTTGGAAGCAGAACATGCACAGAGTGATCCTGAATTC
ACGGCCAAGGCACGTCAAATGCTCGCAGTCTTCGGCAACTCAGAGGTCGA
TAGATACACCAAGTCCCGAAATTTGCCCGCATTGATTGAGTTCTACGAGA
AGTACTCCAGTCGTCTGCCACTGACTGTCCAGGATCGGACCTATGCCAAC
AATGTGATCAGGAGGTACCGGGCACACAACAACCAACAGGTCGATGGTGT
TCCTGCTCAGGGCGGAGTTGGTGTGGTGTTCGCGCTACTTCTTCCTTTCG
CTGTGTCAATTGTGGAAGGAATCGCCAAGGCGATCAGAGAAGCAAGCTTT
CTAGACCATTT
BO34082.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:21:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotF-RA | 378 | CG31691-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Victoria-RA | 405 | CG33117-PA | 118..245 | 86..213 | 190 | 76.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:21:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotF-RA | 506 | CG31691-RA | 46..420 | 17..391 | 1875 | 100 | Plus |
Victoria-RA | 522 | CG33117-RA | 118..245 | 86..213 | 190 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:21:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19911901..19912253 | 391..39 | 1765 | 100 | Minus |
2L | 23513712 | 2L | 19913215..19913342 | 213..86 | 190 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:21:19 has no hits.
BO34082.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:43:27 Download gff for
BO34082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotF-RA | 46..420 | 17..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:27 Download gff for
BO34082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotF-RA | 46..420 | 17..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:46 Download gff for
BO34082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotF-RA | 46..420 | 17..393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:46 Download gff for
BO34082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19911897..19912252 | 40..393 | 99 | <- | Minus |
2L | 19912310..19912332 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:27 Download gff for
BO34082.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19911897..19912252 | 40..393 | 99 | <- | Minus |
arm_2L | 19912310..19912332 | 17..39 | 100 | | Minus |
BO34082.pep Sequence
Translation from 16 to 409
> BO34082.pep
MKTVILFGFLLALLGYLEAEHAQSDPEFTAKARQMLAVFGNSEVDRYTKS
RNLPALIEFYEKYSSRLPLTVQDRTYANNVIRRYRAHNNQQVDGVPAQGG
VGVVFALLLPFAVSIVEGIAKAIREASFLDH
BO34082.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotF-PA | 125 | CG31691-PA | 1..125 | 1..125 | 626 | 100 | Plus |
Victoria-PA | 134 | CG33117-PA | 16..116 | 1..100 | 284 | 57.4 | Plus |
TotM-PB | 131 | CG14027-PB | 10..129 | 6..123 | 190 | 39 | Plus |
TotM-PA | 131 | CG14027-PA | 10..129 | 6..123 | 190 | 39 | Plus |