BO34112.complete Sequence
802 bp assembled on 2013-05-14
GenBank Submission: KX798365
> BO34112.complete
GAAGTTATCAGTTGACATGACTGAGCGCGAGAACAATGTGTACAAGGCAA
AGCTGGCCGAACAGGCCGAGCGCTACGACGAAATGGTGGAGGCCATGAAG
AAGGTCGCCTCCATGGACGTAGAGCTGACCGTCGAGGAGCGAAATCTGCT
GTCGGTGGCGTACAAGAATGTGATTGGAGCACGCCGTGCCTCGTGGCGCA
TCATCACCTCGATCGAACAGAAGGAGGAGAACAAGGGGGCCGAGGAGAAA
TTGGAGATGATCAAAACCTATCGCGGACAGGTGGAGAAGGAGCTGCGCGA
CATCTGCTCGGATATACTGAACGTGCTCGAGAAGCATCTCATTCCATGCG
CCACATCCGGCGAAAGCAAAGTATTCTACTATAAGATGAAGGGCGACTAC
CATCGCTACCTGGCCGAATTCGCCACCGGCTCCGACCGCAAGGATGCGGC
AGAGAACTCGCTGATTGCCTACAAGGCGGCCAGCGATATTGCCATGAACG
ATCTGCCACCAACACACCCCATCCGTTTGGGCTTGGCATTGAACTTCTCG
GTGTTCTACTATGAGATTCTCAACTCGCCGGACCGCGCTTGCCGCTTGGC
GAAAGCCGCTTTCGATGATGCCATTGCCGAGTTGGATACACTGAGCGAAG
AGAGCTACAAAGACTCGACACTCATCATGCAGCTGCTGCGCGACAACCTC
ACATTATGGACGTCCGATATGCAGGCAGAAGGTGATGGCGAGCCCAAAGA
GCAAATCCAGGATGTTGAGGATCAGGACGTGTCGGCAAGCTTTCTAGACC
AT
BO34112.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-RC | 771 | CG31196-PC | 1..768 | 17..784 | 3825 | 99.9 | Plus |
| 14-3-3epsilon-RD | 783 | CG31196-PD | 1..780 | 17..784 | 3670 | 98.3 | Plus |
| 14-3-3epsilon-RB | 786 | CG31196-PB | 1..783 | 17..784 | 3640 | 98 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-RC | 1221 | CG31196-RC | 160..927 | 17..784 | 3825 | 99.9 | Plus |
| 14-3-3epsilon-RD | 3360 | CG31196-RD | 316..1095 | 17..784 | 3670 | 98.3 | Plus |
| 14-3-3epsilon-RB | 3092 | CG31196-RB | 316..1098 | 17..784 | 3640 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18247432..18247905 | 80..553 | 2355 | 99.8 | Plus |
| 3R | 32079331 | 3R | 18247970..18248153 | 550..733 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 18242846..18242909 | 17..80 | 320 | 100 | Plus |
| 2R | 25286936 | 2R | 10107470..10107576 | 611..717 | 280 | 84.1 | Plus |
| 3R | 32079331 | 3R | 18248231..18248285 | 730..784 | 275 | 100 | Plus |
| 2R | 25286936 | 2R | 10106354..10106449 | 509..604 | 210 | 81.2 | Plus |
| 2R | 25286936 | 2R | 10106006..10106101 | 509..604 | 210 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:35:50 has no hits.
BO34112.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:46 Download gff for
BO34112.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RC | 316..1083 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:30 Download gff for
BO34112.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RC | 160..927 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:36 Download gff for
BO34112.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RC | 160..927 | 17..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:36 Download gff for
BO34112.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18248233..18248285 | 732..786 | 96 | | Plus |
| 3R | 18242846..18242909 | 17..80 | 100 | -> | Plus |
| 3R | 18247433..18247902 | 81..550 | 99 | -> | Plus |
| 3R | 18247971..18248151 | 551..731 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:30 Download gff for
BO34112.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14068568..14068631 | 17..80 | 100 | -> | Plus |
| arm_3R | 14073155..14073624 | 81..550 | 99 | -> | Plus |
| arm_3R | 14073693..14073873 | 551..731 | 100 | -> | Plus |
| arm_3R | 14073955..14074007 | 732..786 | 96 | | Plus |
BO34112.pep Sequence
Translation from 16 to 802
> BO34112.pep
MTERENNVYKAKLAEQAERYDEMVEAMKKVASMDVELTVEERNLLSVAYK
NVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDI
LNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLI
AYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD
DAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEGDGEPKEQIQDV
EDQDVSASFLDH
BO34112.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-PC | 256 | CG31196-PC | 1..256 | 1..256 | 1299 | 100 | Plus |
| 14-3-3epsilon-PD | 260 | CG31196-PD | 1..260 | 1..256 | 1284 | 98.5 | Plus |
| 14-3-3epsilon-PB | 261 | CG31196-PB | 1..261 | 1..256 | 1283 | 98.1 | Plus |
| 14-3-3epsilon-PA | 262 | CG31196-PA | 1..262 | 1..256 | 1282 | 97.7 | Plus |
| 14-3-3zeta-PI | 248 | CG17870-PI | 5..244 | 3..245 | 818 | 67.1 | Plus |
