BO34113.complete Sequence
2062 bp assembled on 2013-09-16
GenBank Submission: KX794979
> BO34113.complete
GAAGTTATCAGTCGACATGGCAGAGAACACAGAGTACACCGATGAGGGCG
GCGAGTACGAGGACGATGAGAACCAGTACCTTGGCGAACAGCACATGATG
GAGGAGGGGCCCGACGAGGACCTCTTCTCCAAGCTGGGCGAGTCCTCCGA
CGATCCCGAGCAGAAGCGCATGTACATGGAGTACCTGGCGCTGATCAAGG
AGATCGATTGCCAGAACAAGATCATCCAGGACATCAAGAGCAACATCATG
GACATGTGCGCCAAGCCCTGCAAGACCCGCAACGAACTGCGCGAGATCAA
GCGGTTGAGGATTTGCATGGAGCAGGAGAACATTAAGCTGCACACCATGA
TGAACAGAGCGGTGCAGCTGCAAAACTTCGGCTCCCATCGGCACTACAAG
GAGCTGGCCATGACCACCACCGTCGACGAGGACAACCTGTCACCGTATAT
GTGTGGCATCGGTCCTTGTGCTCCAGCTGGCAGCGCCACGGATCCCTGTA
GCGAAGAGCCTAGCTCGTGTGCCAGTGTTTGTGGTGGCGGCGGAGGCGGT
GGAGGTCAACGGGACATGGCTGGTCAGGACGACAAGTTGATCTGCGCTCT
GCAAAAGGCCATGCAGAAGATGAAGGGCGCTTGTCCTGAGGACAAGAAGA
TGATCGAAGAGATCGCCTGCGCTATAATGAGCTGCAAGAAGCAGCCGGTA
TGCGTTCCGGGTCCCTGTCCGCCACCACCCTGTCCGGGTCCTTGCCAAGG
TCCTTGCCCGGAGAGCAGCAGCAGCAGCATTGCCCCATGTCCTCCTCCCT
GTCCAGCCAAACGGAAGGCTCAGAAGGCTCCCTGCCCCCAGCCCCAGCCC
CAGCCACCGGGCAAGTGCGAGTCCTTGGAGAAACTGAAGCGGCGCATCCA
ATGCATGCAGACCTCGGTGAAGAAGTTGCTCCAGGAGGTGAGCAATCGGG
ATGCGTCCGAACCCTGTGACGTCGACGACGATGACGATGAAGGAGAGGAG
GACCCCTGCTCCAGGCCGTGTCCTCCCAGGCCGCCGTGTCCCGAGGATCC
AGACCCACTGGTCATCTGCGGCGGAAAGCGGAACACCAAGGCCGACAAGT
ACGAGAAGATGAAGGAGAACTACACCAGGCTGCTAACCGAGTTTCAGCGC
AAGGACTGCCAGATGAAGGAGATGCAGAAGCGAATGAAGGGTATCTGTGG
TCCCTGTCCATCGAAAGGGGGCGACGGGGATGCCGATGCCGCCGAGCTGA
ATCTACTTCGAGCGCGGGTCAACGAGCTCAAGGAGGAGCAGCTGGAGTTC
AAGTGCATCATGAAGGAGCAGTCGCAGCAGTTAGAGGACTACCGCAACAA
GTACCTGCTGGCCCAGCAGAAGGTCGAGGAACAGTGCGTCTCCCTAGAGA
AGCTGAACATGAACAACAAACGCATCGAACAGCAGATCAACACGGAGGTC
AAAGAGATTCGAGCTAAGTTCCAAGAGAAACTGAACGAGTTACTGCACTT
CCCCAAGCTCTTAGAGAACGAGCAGCTGAAGCTGGCCCAGGTTTGCAAGG
AGAAGGATGAGATGCAGACGAAACTGGTGGTGGTCTGCAAGGAGCTCAAG
GCCTGCAAGACGCAGATGGAGCAGCAACCCAACGTCGATGTGCGACCTCA
GCTGGCCCAGTGCCAAATGGAACTGACTCAGGCCAGGAATGAACTGGAGG
AGCTTCTCCGACAGAGGGATCTCTTCTGCGAACAGCTCAAGTCCACCCAA
GACGATCTGGACACTCTGCGAACTGAATCCGCCAAGATCATAGCCGGCAC
CAAGGAACGGGCCGAGCTGATCAAGTCCCAGCAACAGGAACAGATCAATC
GGCTTGAGAAGGAGTTGGCTCAGTGCCGAGCAACTGCCTCGCTGTCGGTC
AACGATCGGGAGGCTGTCATCCGCGAGATGCAGGGTCAACTGAACACACT
CTCCTACAGCTTCGATGCCGCCCAGAAGCAGATCAAAACGCTGCGCAATC
ACATCGCATATGTGTCCAACGAAAACTGCTTCCCCGTCAAGTGCGCAAGC
TTTCTAGACCAT
BO34113.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3213-RA | 2031 | CG3213-PA | 1..2028 | 17..2044 | 10125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3213-RA | 2379 | CG3213-RA | 189..2216 | 17..2044 | 10125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3517436..3519463 | 2044..17 | 10125 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:45:55 has no hits.
BO34113.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:42 Download gff for
BO34113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3213-RA | 189..2216 | 17..2046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:37 Download gff for
BO34113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3213-RA | 189..2216 | 17..2046 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:37 Download gff for
BO34113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3517434..3519463 | 17..2046 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:42 Download gff for
BO34113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3517434..3519463 | 17..2046 | 99 | | Minus |
BO34113.pep Sequence
Translation from 16 to 2062
> BO34113.pep
MAENTEYTDEGGEYEDDENQYLGEQHMMEEGPDEDLFSKLGESSDDPEQK
RMYMEYLALIKEIDCQNKIIQDIKSNIMDMCAKPCKTRNELREIKRLRIC
MEQENIKLHTMMNRAVQLQNFGSHRHYKELAMTTTVDEDNLSPYMCGIGP
CAPAGSATDPCSEEPSSCASVCGGGGGGGGQRDMAGQDDKLICALQKAMQ
KMKGACPEDKKMIEEIACAIMSCKKQPVCVPGPCPPPPCPGPCQGPCPES
SSSSIAPCPPPCPAKRKAQKAPCPQPQPQPPGKCESLEKLKRRIQCMQTS
VKKLLQEVSNRDASEPCDVDDDDDEGEEDPCSRPCPPRPPCPEDPDPLVI
CGGKRNTKADKYEKMKENYTRLLTEFQRKDCQMKEMQKRMKGICGPCPSK
GGDGDADAAELNLLRARVNELKEEQLEFKCIMKEQSQQLEDYRNKYLLAQ
QKVEEQCVSLEKLNMNNKRIEQQINTEVKEIRAKFQEKLNELLHFPKLLE
NEQLKLAQVCKEKDEMQTKLVVVCKELKACKTQMEQQPNVDVRPQLAQCQ
MELTQARNELEELLRQRDLFCEQLKSTQDDLDTLRTESAKIIAGTKERAE
LIKSQQQEQINRLEKELAQCRATASLSVNDREAVIREMQGQLNTLSYSFD
AAQKQIKTLRNHIAYVSNENCFPVKCASFLDH
BO34113.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3213-PA | 676 | CG3213-PA | 1..676 | 1..676 | 3613 | 100 | Plus |
| CG8851-PA | 644 | CG8851-PA | 325..593 | 403..669 | 342 | 26.8 | Plus |
| CG8851-PC | 723 | CG8851-PC | 404..672 | 403..669 | 342 | 26.8 | Plus |
| CG13405-PB | 190 | CG13405-PB | 25..153 | 9..138 | 253 | 42.7 | Plus |
| CG13405-PA | 190 | CG13405-PA | 25..153 | 9..138 | 253 | 42.7 | Plus |
