Clone BO34114 Report

Search the DGRC for BO34114

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptmod(r)-RB
Protein status:BO34114.pep: Imported from assembly
Sequenced Size:622

Clone Sequence Records

BO34114.complete Sequence

622 bp assembled on 2013-05-14

GenBank Submission: KX796691

> BO34114.complete
GAAGTTATCAGTCGACATGCCGACTACACCACAGGATCTTGCCCTTGCCC
ACTCTCTTGCTCAAAGACCTCCGACCGATAGCAGTGAGGCCAAGGAGCAG
GAGGCCGGCGAATCGGACAACCTGCCCAACCTGTGCACTTTGTCGCTGGA
CGAACTGAAACAGCTGGACAGGGATCCCGAGTTCTTCGAGGACTTCATCG
AGGAGATGTCCGTGGTGCAGTACCTGAACGAGGAGCTCGATTCAATGATG
GACCAGGTGGAGATTATATCAAGAGAGAACGAGTGCAAGGGCATTCATCT
GGTAGAGCTGAAGCGCCGACTCAGCGACGATTTTACAGCTTTAAAAAACC
TAGGCGAGAAATGCGACCGGCTGAACAAGAAGTACTTCAAGAAGTCGGAT
GAATACGCGCCTCAGCATATCAGGATTGCAGCTTCCAATGCCGATGGCGA
CTGCGATCGTCACGTGGAGCACTTCCTGAACGGAAAGACCGACGTGCAGA
CTTTCCTCAACACGTACCAGTGGTCGAAGAAGATCAGTACCGAGCGCAAG
GCCAAAGAGGAGCGCCTGGGCACCCAGCTCAGTGCTCTGGAGCGGGCCGG
TATCGCAAGCTTTCTAGACCAT

BO34114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
mod(r)-RE 591 CG17828-PE 1..588 17..604 2940 100 Plus
mod(r)-RD 591 CG17828-PD 1..588 17..604 2940 100 Plus
mod(r)-RB 591 CG17828-PB 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
mod(r)-RE 1323 CG17828-RE 310..897 17..604 2940 100 Plus
mod(r)-RD 1331 CG17828-RD 318..905 17..604 2940 100 Plus
mod(r)-RB 1099 CG17828-RB 86..673 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 621891..622151 17..277 1290 99.6 Plus
X 23542271 X 622445..622625 424..604 905 100 Plus
X 23542271 X 622207..622358 273..424 760 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:36:10 has no hits.

BO34114.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:54 Download gff for BO34114.complete
Subject Subject Range Query Range Percent Splice Strand
mod(r)-RB 86..673 17..606 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:41 Download gff for BO34114.complete
Subject Subject Range Query Range Percent Splice Strand
mod(r)-RB 86..673 17..606 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:45 Download gff for BO34114.complete
Subject Subject Range Query Range Percent Splice Strand
mod(r)-RB 86..673 17..606 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:45 Download gff for BO34114.complete
Subject Subject Range Query Range Percent Splice Strand
X 621891..622146 17..272 100 -> Plus
X 622207..622358 273..424 100 -> Plus
X 622446..622625 425..606 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:41 Download gff for BO34114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 515924..516179 17..272 100 -> Plus
arm_X 516240..516391 273..424 100 -> Plus
arm_X 516479..516658 425..606 98   Plus

BO34114.pep Sequence

Translation from 16 to 622

> BO34114.pep
MPTTPQDLALAHSLAQRPPTDSSEAKEQEAGESDNLPNLCTLSLDELKQL
DRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR
RLSDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRIAASNADGDCDRHV
EHFLNGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLSALERAGIASFL
DH

BO34114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
mod(r)-PE 196 CG17828-PE 1..196 1..196 1016 100 Plus
mod(r)-PD 196 CG17828-PD 1..196 1..196 1016 100 Plus
mod(r)-PB 196 CG17828-PB 1..196 1..196 1016 100 Plus
mod(r)-PF 200 CG17828-PF 1..200 1..196 1001 98 Plus
mod(r)-PC 200 CG17828-PC 1..200 1..196 1001 98 Plus