BO34124.complete Sequence
838 bp assembled on 2013-05-14
GenBank Submission: KX793830
> BO34124.complete
GAAGTTATCAGTCGACATGGAAGATGTCCGCACTCTGCGGTATGATATCC
AATGGGATGTTTTCGAGGGCATGCAAATAGTTGACATCAATTCAAAGTAC
TATGACATGGTGATCGAGTTCATGTGGTCCAATTCGTTTCTGAAAAGTCT
TGTCTATGAGAGTCTGGGACTATTCGATTTGCCGGACATGAAACAGACTT
ATTCTTGGTATGTGCGACACATCCTGCGAAACGAGTGCTCCGTGATGATG
ATTAGCGAAGATGAAACGCAAATAAGGGCAGTGGGATTGCTGGAATGGAT
GACCGAGGAATGGCACTCCTGGGTCTTCTTTCCCTCTTCGTTGCCCAGGA
ATCTGTTCCAGCAGATCATAATGATGAAGAAGGAGCTCATCGATGCGACC
AAAGCGAACATGGGCATCTCCACCTACGATGCACTGTTCGTCCACGAGAT
CGCCTTTCCGGATGAGCTCTACTTTAACCGGGATTTCCTGTCGACCATCT
TCGATGTCTTTGGCTTTGTGGCCCAGCACATGCACATGCCGCGGGTCAGC
TTCATCGCCCTCAGCTCCGTGGACCAGGAGGCCGCCAGTCTGATCGATTA
CGAAGAGATCGGGCGGACTATCTACTCGATCTACAAGGTTGGCAACACCC
GGCCCTTTGACATCCTTCGCGAGCTAGACGAGATGTACGCACTGCTGTTT
GAACTGGCCGTCTCGCCGGTACTGAAGTACATTGAAATGCCCGGTTTCGA
GGAGTTCCACGAGGCCCTGGATGCCAGGTTGGCCAAGGAGGCAGCCGAAA
AGCGCCACGACGACGATATAGCAAGCTTTCTAGACCAT
BO34124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:36:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17375-RB | 807 | CG17375-PB | 1..803 | 17..819 | 4015 | 100 | Plus |
| CG17375-RD | 729 | CG17375-PD | 3..725 | 97..819 | 3615 | 100 | Plus |
| CG17375-RC | 729 | CG17375-PC | 3..725 | 97..819 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17375-RB | 981 | CG17375-RB | 116..918 | 17..819 | 4015 | 100 | Plus |
| CG17375-RD | 1280 | CG17375-RD | 116..922 | 17..819 | 3940 | 99.5 | Plus |
| CG17375-RC | 985 | CG17375-RC | 116..922 | 17..819 | 3940 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:36:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6804682..6805180 | 819..321 | 2495 | 100 | Minus |
| 2L | 23513712 | 2L | 6805245..6805360 | 322..207 | 580 | 100 | Minus |
| 2L | 23513712 | 2L | 6805429..6805542 | 210..97 | 570 | 100 | Minus |
| 2L | 23513712 | 2L | 6805597..6805677 | 97..17 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:36:06 has no hits.
BO34124.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:52 Download gff for
BO34124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17375-RB | 116..918 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:38 Download gff for
BO34124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17375-RB | 116..918 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:45 Download gff for
BO34124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17375-RB | 116..918 | 17..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:45 Download gff for
BO34124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6805432..6805542 | 97..207 | 100 | <- | Minus |
| 2L | 6805598..6805677 | 17..96 | 100 | | Minus |
| 2L | 6804678..6805179 | 322..822 | 99 | <- | Minus |
| 2L | 6805246..6805359 | 208..321 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:38 Download gff for
BO34124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6804678..6805179 | 322..822 | 99 | <- | Minus |
| arm_2L | 6805246..6805359 | 208..321 | 100 | <- | Minus |
| arm_2L | 6805432..6805542 | 97..207 | 100 | <- | Minus |
| arm_2L | 6805598..6805677 | 17..96 | 100 | | Minus |
BO34124.pep Sequence
Translation from 16 to 838
> BO34124.pep
MEDVRTLRYDIQWDVFEGMQIVDINSKYYDMVIEFMWSNSFLKSLVYESL
GLFDLPDMKQTYSWYVRHILRNECSVMMISEDETQIRAVGLLEWMTEEWH
SWVFFPSSLPRNLFQQIIMMKKELIDATKANMGISTYDALFVHEIAFPDE
LYFNRDFLSTIFDVFGFVAQHMHMPRVSFIALSSVDQEAASLIDYEEIGR
TIYSIYKVGNTRPFDILRELDEMYALLFELAVSPVLKYIEMPGFEEFHEA
LDARLAKEAAEKRHDDDIASFLDH
BO34124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17375-PB | 268 | CG17375-PB | 1..268 | 1..268 | 1400 | 100 | Plus |
| CG17375-PD | 242 | CG17375-PD | 2..242 | 28..268 | 1258 | 100 | Plus |
| CG17375-PC | 242 | CG17375-PC | 2..242 | 28..268 | 1258 | 100 | Plus |
