Clone BO34127 Report

Search the DGRC for BO34127

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG30416-RB
Protein status:BO34127.pep: Imported from assembly
Sequenced Size:1642

Clone Sequence Records

BO34127.complete Sequence

1642 bp assembled on 2013-09-16

GenBank Submission: KX798681

> BO34127.complete
GAAGTTATCAGTCGACATGGACTACAGAGCGATGAATGAATCCTGCCAAT
GTCCACGGTGTCGGTATGAACTTCGTTTGCCCAATCAGCCGATGCCCTGC
CAAGAGAAATGTTTCCCGGAGAAATATCTGATGTGTGGTTCGGATCTACG
TCCTCGCTGGCAGAACAGACCAGATCCTCGGGAAGTTTTTCAGAATTTTT
CCCAAAGAAATCCTCAAATACTTTCTCAGGAATCTGTTCAGAGTTGGAGT
TTCCAGCATCCTCAAAACTGTTTCTGTGGACATCAACCTCCAATGCGAGC
TCTGCCCGACCATTCTCAGCAATTTTCCCAAGAATATTCTCAGCAGTGTT
CGCAACAATCTCCTTGTGTTTCTCGTTGTGGCCAACAAAATCGACAGAAC
TGCTTTCAGCCGCCTTGTCCAAACTGGACCAGACCATGTTGTTGCATAAC
CCACGAAGTCGGCGTTCAAACGGACGAGATGGACGAATGCGAGCCCGAGT
ATATAGCGATCACCGACATCACCACAAAGGAGATGAAGGTGAAGCATCGC
ACCGGAAAGACGGAGACGATCATCGAAAAGGTTCAGTCGGTCACCCAGTT
TCCCGTGACGGAAACTCAGCGCCTTGGGGAGAATGATTACGAACCAAAGT
ACGTCCAAGACAAGGATGCAATTCCTTATCGAGCCATGAGGCATTCCGAG
CTGGAGCCCTTGCTGGTGTCGATGAGGGCGGAGGTGCCAATAACTGAATC
TAAAGATGCAAAGGAGGAGATCGTCTACCAGGAATATGAGAAGACGGAGC
GCGATTTTGATGACCCTAAAGCCAAGGTAGAGAAGACCATCATCAAGGTC
AAAATTCCGGTGGACTCACCCGAAGCCGAAGAATCGAACTCCAGCCCGCC
CAGTGGTATACCACCTCCTTCCCAACTGCCCAGCGATATACCACCTCCTT
CCCAACTGCCCAGCGATATACCACCTCCTTCCCAACTGCCCAGCGATATA
CCACCGCCATCCCAACTGCCCAGTGGTACACCACCTCCTTCCCGACTGCC
TACTAGTATAACCCCTCCTTCCCAAGTGCCAAACAAGGATTCATCCCAGC
CATCACTACCAACAGACATTTCCTCAATTTCGGAGGAAGATCCATCACTT
GTCAAGAATGAAGATACAAGTTCGACAGATCTCGATGTATATGACCAGAA
GGAATCAGTAGAGAAGGAGATGAATGAAGGGCATTCCGAATCTGACATCG
TGAGTACCGTGCAGGTAAAGGTCACCAATAGAAAGGAGGCATCCGTGAGG
GGTCATCATGACCGGGAGCCCAAGAAAACAGCGATCTTCGAGAGCAGCGT
GTCCCAGGTGCTAATAAAGAAGCCTGAGAAGAAACCGGAAGAAAAAAAAC
CGAAGCGACCGCCACCCAAAGTGGAAGTCAAGCTAGGCTATCCACCAAAC
GACTTGGTCTGCAGATACGCCAATCCTCCGCGATGCAGACCTAAATGCGA
CAGCTGCAGATGTCCTTGTCCGCCGTCCATCTCCTGCAACCAATGTCCTC
CCTGTGCCCCCAGCACATGCCAATGCGATCCCATCTACGGTTTCGGCGGC
AAGTGTGTCGGATACTATTGTATTGCAAGCTTTCTAGACCAT

BO34127.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG30416-RB 1611 CG30416-PB 1..1608 17..1624 8010 99.9 Plus
CG30416-RC 1620 CG30416-PC 1..1617 17..1624 7885 99.3 Plus
CG30416-RB 1611 CG30416-PB 882..1034 928..1080 495 88.2 Plus
CG30416-RB 1611 CG30416-PB 912..1064 898..1050 495 88.2 Plus
CG30416-RC 1620 CG30416-PC 882..1034 928..1080 495 88.2 Plus
CG30416-RC 1620 CG30416-PC 912..1064 898..1050 495 88.2 Plus
CG30416-RB 1611 CG30416-PB 882..974 958..1050 345 91.4 Plus
CG30416-RB 1611 CG30416-PB 942..1034 898..990 345 91.4 Plus
CG30416-RC 1620 CG30416-PC 882..974 958..1050 345 91.4 Plus
CG30416-RC 1620 CG30416-PC 942..1034 898..990 345 91.4 Plus
CG30416-RB 1611 CG30416-PB 882..974 988..1080 225 82.8 Plus
CG30416-RB 1611 CG30416-PB 972..1064 898..990 225 82.8 Plus
CG30416-RC 1620 CG30416-PC 882..974 988..1080 225 82.8 Plus
CG30416-RC 1620 CG30416-PC 972..1064 898..990 225 82.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG30416-RB 1843 CG30416-RB 106..1713 17..1624 8010 99.9 Plus
CG30416-RC 1852 CG30416-RC 106..1722 17..1624 7885 99.3 Plus
CG30416-RB 1843 CG30416-RB 987..1139 928..1080 495 88.2 Plus
CG30416-RB 1843 CG30416-RB 1017..1169 898..1050 495 88.2 Plus
CG30416-RC 1852 CG30416-RC 987..1139 928..1080 495 88.2 Plus
CG30416-RC 1852 CG30416-RC 1017..1169 898..1050 495 88.2 Plus
CG30416-RB 1843 CG30416-RB 1047..1139 898..990 345 91.4 Plus
CG30416-RB 1843 CG30416-RB 987..1079 958..1050 345 91.4 Plus
CG30416-RC 1852 CG30416-RC 987..1079 958..1050 345 91.4 Plus
CG30416-RC 1852 CG30416-RC 1047..1139 898..990 345 91.4 Plus
CG30416-RB 1843 CG30416-RB 987..1079 988..1080 225 82.8 Plus
CG30416-RB 1843 CG30416-RB 1077..1169 898..990 225 82.8 Plus
CG30416-RC 1852 CG30416-RC 987..1079 988..1080 225 82.8 Plus
CG30416-RC 1852 CG30416-RC 1077..1169 898..990 225 82.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23322141..23323294 1170..17 5755 99.9 Minus
2R 25286936 2R 23321611..23322066 1624..1169 2265 99.8 Minus
2R 25286936 2R 23322231..23322383 1050..898 495 88.2 Minus
2R 25286936 2R 23322261..23322413 1080..928 495 88.2 Minus
2R 25286936 2R 23322261..23322353 990..898 345 91.4 Minus
2R 25286936 2R 23322321..23322413 1050..958 345 91.4 Minus
2R 25286936 2R 23322231..23322323 990..898 225 82.8 Minus
2R 25286936 2R 23322321..23322413 1080..988 225 82.8 Minus
Blast to na_te.dros performed on 2014-11-28 13:45:08 has no hits.

BO34127.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:20 Download gff for BO34127.complete
Subject Subject Range Query Range Percent Splice Strand
CG30416-RB 106..1713 17..1626 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:18 Download gff for BO34127.complete
Subject Subject Range Query Range Percent Splice Strand
CG30416-RB 106..1713 17..1626 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:18 Download gff for BO34127.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23321609..23322064 1171..1626 99 <- Minus
2R 23322141..23323294 17..1170 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:20 Download gff for BO34127.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19209132..19209587 1171..1626 99 <- Minus
arm_2R 19209664..19210817 17..1170 99   Minus

BO34127.pep Sequence

Translation from 16 to 1642

> BO34127.pep
MDYRAMNESCQCPRCRYELRLPNQPMPCQEKCFPEKYLMCGSDLRPRWQN
RPDPREVFQNFSQRNPQILSQESVQSWSFQHPQNCFCGHQPPMRALPDHS
QQFSQEYSQQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGV
QTDEMDECEPEYIAITDITTKEMKVKHRTGKTETIIEKVQSVTQFPVTET
QRLGENDYEPKYVQDKDAIPYRAMRHSELEPLLVSMRAEVPITESKDAKE
EIVYQEYEKTERDFDDPKAKVEKTIIKVKIPVDSPEAEESNSSPPSGIPP
PSQLPSDIPPPSQLPSDIPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITP
PSQVPNKDSSQPSLPTDISSISEEDPSLVKNEDTSSTDLDVYDQKESVEK
EMNEGHSESDIVSTVQVKVTNRKEASVRGHHDREPKKTAIFESSVSQVLI
KKPEKKPEEKKPKRPPPKVEVKLGYPPNDLVCRYANPPRCRPKCDSCRCP
CPPSISCNQCPPCAPSTCQCDPIYGFGGKCVGYYCIASFLDH

BO34127.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30416-PB 536 CG30416-PB 1..536 1..536 2954 100 Plus
CG30416-PC 539 CG30416-PC 1..539 1..536 2940 99.4 Plus
CG11835-PD 795 CG11835-PD 308..630 154..517 175 22.8 Plus
CG11835-PC 795 CG11835-PC 308..630 154..517 175 22.8 Plus
CG11835-PB 795 CG11835-PB 308..630 154..517 175 22.8 Plus