BO34127.complete Sequence
1642 bp assembled on 2013-09-16
GenBank Submission: KX798681
> BO34127.complete
GAAGTTATCAGTCGACATGGACTACAGAGCGATGAATGAATCCTGCCAAT
GTCCACGGTGTCGGTATGAACTTCGTTTGCCCAATCAGCCGATGCCCTGC
CAAGAGAAATGTTTCCCGGAGAAATATCTGATGTGTGGTTCGGATCTACG
TCCTCGCTGGCAGAACAGACCAGATCCTCGGGAAGTTTTTCAGAATTTTT
CCCAAAGAAATCCTCAAATACTTTCTCAGGAATCTGTTCAGAGTTGGAGT
TTCCAGCATCCTCAAAACTGTTTCTGTGGACATCAACCTCCAATGCGAGC
TCTGCCCGACCATTCTCAGCAATTTTCCCAAGAATATTCTCAGCAGTGTT
CGCAACAATCTCCTTGTGTTTCTCGTTGTGGCCAACAAAATCGACAGAAC
TGCTTTCAGCCGCCTTGTCCAAACTGGACCAGACCATGTTGTTGCATAAC
CCACGAAGTCGGCGTTCAAACGGACGAGATGGACGAATGCGAGCCCGAGT
ATATAGCGATCACCGACATCACCACAAAGGAGATGAAGGTGAAGCATCGC
ACCGGAAAGACGGAGACGATCATCGAAAAGGTTCAGTCGGTCACCCAGTT
TCCCGTGACGGAAACTCAGCGCCTTGGGGAGAATGATTACGAACCAAAGT
ACGTCCAAGACAAGGATGCAATTCCTTATCGAGCCATGAGGCATTCCGAG
CTGGAGCCCTTGCTGGTGTCGATGAGGGCGGAGGTGCCAATAACTGAATC
TAAAGATGCAAAGGAGGAGATCGTCTACCAGGAATATGAGAAGACGGAGC
GCGATTTTGATGACCCTAAAGCCAAGGTAGAGAAGACCATCATCAAGGTC
AAAATTCCGGTGGACTCACCCGAAGCCGAAGAATCGAACTCCAGCCCGCC
CAGTGGTATACCACCTCCTTCCCAACTGCCCAGCGATATACCACCTCCTT
CCCAACTGCCCAGCGATATACCACCTCCTTCCCAACTGCCCAGCGATATA
CCACCGCCATCCCAACTGCCCAGTGGTACACCACCTCCTTCCCGACTGCC
TACTAGTATAACCCCTCCTTCCCAAGTGCCAAACAAGGATTCATCCCAGC
CATCACTACCAACAGACATTTCCTCAATTTCGGAGGAAGATCCATCACTT
GTCAAGAATGAAGATACAAGTTCGACAGATCTCGATGTATATGACCAGAA
GGAATCAGTAGAGAAGGAGATGAATGAAGGGCATTCCGAATCTGACATCG
TGAGTACCGTGCAGGTAAAGGTCACCAATAGAAAGGAGGCATCCGTGAGG
GGTCATCATGACCGGGAGCCCAAGAAAACAGCGATCTTCGAGAGCAGCGT
GTCCCAGGTGCTAATAAAGAAGCCTGAGAAGAAACCGGAAGAAAAAAAAC
CGAAGCGACCGCCACCCAAAGTGGAAGTCAAGCTAGGCTATCCACCAAAC
GACTTGGTCTGCAGATACGCCAATCCTCCGCGATGCAGACCTAAATGCGA
CAGCTGCAGATGTCCTTGTCCGCCGTCCATCTCCTGCAACCAATGTCCTC
CCTGTGCCCCCAGCACATGCCAATGCGATCCCATCTACGGTTTCGGCGGC
AAGTGTGTCGGATACTATTGTATTGCAAGCTTTCTAGACCAT
BO34127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-RB | 1611 | CG30416-PB | 1..1608 | 17..1624 | 8010 | 99.9 | Plus |
CG30416-RC | 1620 | CG30416-PC | 1..1617 | 17..1624 | 7885 | 99.3 | Plus |
CG30416-RB | 1611 | CG30416-PB | 882..1034 | 928..1080 | 495 | 88.2 | Plus |
CG30416-RB | 1611 | CG30416-PB | 912..1064 | 898..1050 | 495 | 88.2 | Plus |
CG30416-RC | 1620 | CG30416-PC | 882..1034 | 928..1080 | 495 | 88.2 | Plus |
CG30416-RC | 1620 | CG30416-PC | 912..1064 | 898..1050 | 495 | 88.2 | Plus |
CG30416-RB | 1611 | CG30416-PB | 882..974 | 958..1050 | 345 | 91.4 | Plus |
CG30416-RB | 1611 | CG30416-PB | 942..1034 | 898..990 | 345 | 91.4 | Plus |
CG30416-RC | 1620 | CG30416-PC | 882..974 | 958..1050 | 345 | 91.4 | Plus |
CG30416-RC | 1620 | CG30416-PC | 942..1034 | 898..990 | 345 | 91.4 | Plus |
CG30416-RB | 1611 | CG30416-PB | 882..974 | 988..1080 | 225 | 82.8 | Plus |
CG30416-RB | 1611 | CG30416-PB | 972..1064 | 898..990 | 225 | 82.8 | Plus |
CG30416-RC | 1620 | CG30416-PC | 882..974 | 988..1080 | 225 | 82.8 | Plus |
CG30416-RC | 1620 | CG30416-PC | 972..1064 | 898..990 | 225 | 82.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-RB | 1843 | CG30416-RB | 106..1713 | 17..1624 | 8010 | 99.9 | Plus |
CG30416-RC | 1852 | CG30416-RC | 106..1722 | 17..1624 | 7885 | 99.3 | Plus |
CG30416-RB | 1843 | CG30416-RB | 987..1139 | 928..1080 | 495 | 88.2 | Plus |
CG30416-RB | 1843 | CG30416-RB | 1017..1169 | 898..1050 | 495 | 88.2 | Plus |
CG30416-RC | 1852 | CG30416-RC | 987..1139 | 928..1080 | 495 | 88.2 | Plus |
CG30416-RC | 1852 | CG30416-RC | 1017..1169 | 898..1050 | 495 | 88.2 | Plus |
CG30416-RB | 1843 | CG30416-RB | 1047..1139 | 898..990 | 345 | 91.4 | Plus |
CG30416-RB | 1843 | CG30416-RB | 987..1079 | 958..1050 | 345 | 91.4 | Plus |
CG30416-RC | 1852 | CG30416-RC | 987..1079 | 958..1050 | 345 | 91.4 | Plus |
CG30416-RC | 1852 | CG30416-RC | 1047..1139 | 898..990 | 345 | 91.4 | Plus |
CG30416-RB | 1843 | CG30416-RB | 987..1079 | 988..1080 | 225 | 82.8 | Plus |
CG30416-RB | 1843 | CG30416-RB | 1077..1169 | 898..990 | 225 | 82.8 | Plus |
CG30416-RC | 1852 | CG30416-RC | 987..1079 | 988..1080 | 225 | 82.8 | Plus |
CG30416-RC | 1852 | CG30416-RC | 1077..1169 | 898..990 | 225 | 82.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23322141..23323294 | 1170..17 | 5755 | 99.9 | Minus |
2R | 25286936 | 2R | 23321611..23322066 | 1624..1169 | 2265 | 99.8 | Minus |
2R | 25286936 | 2R | 23322231..23322383 | 1050..898 | 495 | 88.2 | Minus |
2R | 25286936 | 2R | 23322261..23322413 | 1080..928 | 495 | 88.2 | Minus |
2R | 25286936 | 2R | 23322261..23322353 | 990..898 | 345 | 91.4 | Minus |
2R | 25286936 | 2R | 23322321..23322413 | 1050..958 | 345 | 91.4 | Minus |
2R | 25286936 | 2R | 23322231..23322323 | 990..898 | 225 | 82.8 | Minus |
2R | 25286936 | 2R | 23322321..23322413 | 1080..988 | 225 | 82.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:45:08 has no hits.
BO34127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:20 Download gff for
BO34127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 106..1713 | 17..1626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:18 Download gff for
BO34127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 106..1713 | 17..1626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:18 Download gff for
BO34127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23321609..23322064 | 1171..1626 | 99 | <- | Minus |
2R | 23322141..23323294 | 17..1170 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:20 Download gff for
BO34127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19209132..19209587 | 1171..1626 | 99 | <- | Minus |
arm_2R | 19209664..19210817 | 17..1170 | 99 | | Minus |
BO34127.pep Sequence
Translation from 16 to 1642
> BO34127.pep
MDYRAMNESCQCPRCRYELRLPNQPMPCQEKCFPEKYLMCGSDLRPRWQN
RPDPREVFQNFSQRNPQILSQESVQSWSFQHPQNCFCGHQPPMRALPDHS
QQFSQEYSQQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGV
QTDEMDECEPEYIAITDITTKEMKVKHRTGKTETIIEKVQSVTQFPVTET
QRLGENDYEPKYVQDKDAIPYRAMRHSELEPLLVSMRAEVPITESKDAKE
EIVYQEYEKTERDFDDPKAKVEKTIIKVKIPVDSPEAEESNSSPPSGIPP
PSQLPSDIPPPSQLPSDIPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITP
PSQVPNKDSSQPSLPTDISSISEEDPSLVKNEDTSSTDLDVYDQKESVEK
EMNEGHSESDIVSTVQVKVTNRKEASVRGHHDREPKKTAIFESSVSQVLI
KKPEKKPEEKKPKRPPPKVEVKLGYPPNDLVCRYANPPRCRPKCDSCRCP
CPPSISCNQCPPCAPSTCQCDPIYGFGGKCVGYYCIASFLDH
BO34127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-PB | 536 | CG30416-PB | 1..536 | 1..536 | 2954 | 100 | Plus |
CG30416-PC | 539 | CG30416-PC | 1..539 | 1..536 | 2940 | 99.4 | Plus |
CG11835-PD | 795 | CG11835-PD | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PC | 795 | CG11835-PC | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PB | 795 | CG11835-PB | 308..630 | 154..517 | 175 | 22.8 | Plus |