BO34128.complete Sequence
823 bp assembled on 2013-05-14
GenBank Submission: KX796255
> BO34128.complete
GAAGTTATCAGTCGACATGGCAAACGTGAAGATCCAAGCGCCCACTTTCG
GAGCAGGTGAACAGGTATCTTTAGGTGGCCAAGGGCTTACCGATATTCCG
AGCACGAGGCATGCGAATATCATTTCAGTCAAAATTCGTTTTCGGGTGAA
AACAGTAACTGGAGCATTTTGGGAAATTCAAAGTCTACACAAAATTCAAA
GAATGGGGCGAAAAAGGGGTCGAAAGGAGTATTGTCCCCCCATTTACAAG
CGCCAGAAAGTGGCGCGCGTCACTAACAATGGATACCTCAACTTTATGAC
CGAGTACAAGAAACGCTTTTACGGACTTTCTCCGCAGGACATGGTGCATT
ATGCGGCTAAGCAGTGGACCCAGCTGTCCATGGCTGAGAAGGAAGCTTTC
AAGAGCAAGAAACCATCGACGATTACTTTGAAGAGTCCAGCACAGTACGT
GGCCTGTGAGATGAAAAGCGATGTCGCCGGAGGACAGCAAAGTTCTTGCC
AAAGACAGTCTCCAAGCGCTCGGCTGAGGGAATCGGAGAGGAGATCGTCC
AGATCGAAGACCTTGTGCAGATCAGCAAAGAATCGTCAGCGAGGGAAGCC
GAAACCTCAGCAAAGCAAGCGAAGGCTCAGTCACATGGGCTCGGCAGTGG
CATATATCCACTTCCTGCGCAAGTTCCAAAGGAAGAATACTGAGTTGCGC
ACCATCGATCTGCTGAAGACGGCAACTAGATTGTGGTGCCGGTTGCCCGA
AAGGCATCGCCATGCGTTTGAGAGGCCACTTTGGATTGTTACTATAGGAA
AATCCGCAAGCTTTCTAGACCAT
BO34128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:33:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15510-RD | 606 | CG15510-PD | 1..603 | 203..805 | 2985 | 99.7 | Plus |
CG15510-RB | 606 | CG15510-PB | 1..603 | 203..805 | 2985 | 99.7 | Plus |
CG15510-RC | 582 | CG15510-PC | 205..579 | 431..805 | 1845 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15510-RB | 1053 | CG15510-RB | 157..945 | 17..805 | 3870 | 99.4 | Plus |
CG15510-RD | 769 | CG15510-RD | 1..661 | 145..805 | 3275 | 99.7 | Plus |
CG15510-RC | 745 | CG15510-RC | 263..637 | 431..805 | 1845 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:33:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29836886..29837263 | 407..784 | 1875 | 99.7 | Plus |
3R | 32079331 | 3R | 29836530..29836832 | 107..409 | 1470 | 99 | Plus |
3R | 32079331 | 3R | 29836106..29836198 | 17..109 | 465 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:33:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
blood | 7410 | blood BLOOD 7410bp | 1169..1237 | 697..765 | 138 | 66.7 | Plus |
BO34128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:03 Download gff for
BO34128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15510-RB | 157..945 | 17..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:29 Download gff for
BO34128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15510-RB | 157..945 | 17..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:46 Download gff for
BO34128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15510-RB | 157..945 | 17..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:46 Download gff for
BO34128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29836106..29836197 | 17..108 | 100 | -> | Plus |
3R | 29836532..29836832 | 109..409 | 99 | -> | Plus |
3R | 29836889..29837262 | 410..783 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:29 Download gff for
BO34128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25661828..25661919 | 17..108 | 100 | -> | Plus |
arm_3R | 25662254..25662554 | 109..409 | 99 | -> | Plus |
arm_3R | 25662611..25662984 | 410..783 | 99 | -> | Plus |
BO34128.pep Sequence
Translation from 16 to 823
> BO34128.pep
MANVKIQAPTFGAGEQVSLGGQGLTDIPSTRHANIISVKIRFRVKTVTGA
FWEIQSLHKIQRMGRKRGRKEYCPPIYKRQKVARVTNNGYLNFMTEYKKR
FYGLSPQDMVHYAAKQWTQLSMAEKEAFKSKKPSTITLKSPAQYVACEMK
SDVAGGQQSSCQRQSPSARLRESERRSSRSKTLCRSAKNRQRGKPKPQQS
KRRLSHMGSAVAYIHFLRKFQRKNTELRTIDLLKTATRLWCRLPERHRHA
FERPLWIVTIGKSASFLDH
BO34128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15510-PD | 201 | CG15510-PD | 1..201 | 63..263 | 1057 | 100 | Plus |
CG15510-PB | 201 | CG15510-PB | 1..201 | 63..263 | 1057 | 100 | Plus |
CG15510-PC | 193 | CG15510-PC | 1..193 | 63..263 | 999 | 96 | Plus |