Clone BO34128 Report

Search the DGRC for BO34128

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG15510-RB
Protein status:BO34128.pep: Imported from assembly
Sequenced Size:823

Clone Sequence Records

BO34128.complete Sequence

823 bp assembled on 2013-05-14

GenBank Submission: KX796255

> BO34128.complete
GAAGTTATCAGTCGACATGGCAAACGTGAAGATCCAAGCGCCCACTTTCG
GAGCAGGTGAACAGGTATCTTTAGGTGGCCAAGGGCTTACCGATATTCCG
AGCACGAGGCATGCGAATATCATTTCAGTCAAAATTCGTTTTCGGGTGAA
AACAGTAACTGGAGCATTTTGGGAAATTCAAAGTCTACACAAAATTCAAA
GAATGGGGCGAAAAAGGGGTCGAAAGGAGTATTGTCCCCCCATTTACAAG
CGCCAGAAAGTGGCGCGCGTCACTAACAATGGATACCTCAACTTTATGAC
CGAGTACAAGAAACGCTTTTACGGACTTTCTCCGCAGGACATGGTGCATT
ATGCGGCTAAGCAGTGGACCCAGCTGTCCATGGCTGAGAAGGAAGCTTTC
AAGAGCAAGAAACCATCGACGATTACTTTGAAGAGTCCAGCACAGTACGT
GGCCTGTGAGATGAAAAGCGATGTCGCCGGAGGACAGCAAAGTTCTTGCC
AAAGACAGTCTCCAAGCGCTCGGCTGAGGGAATCGGAGAGGAGATCGTCC
AGATCGAAGACCTTGTGCAGATCAGCAAAGAATCGTCAGCGAGGGAAGCC
GAAACCTCAGCAAAGCAAGCGAAGGCTCAGTCACATGGGCTCGGCAGTGG
CATATATCCACTTCCTGCGCAAGTTCCAAAGGAAGAATACTGAGTTGCGC
ACCATCGATCTGCTGAAGACGGCAACTAGATTGTGGTGCCGGTTGCCCGA
AAGGCATCGCCATGCGTTTGAGAGGCCACTTTGGATTGTTACTATAGGAA
AATCCGCAAGCTTTCTAGACCAT

BO34128.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-RD 606 CG15510-PD 1..603 203..805 2985 99.7 Plus
CG15510-RB 606 CG15510-PB 1..603 203..805 2985 99.7 Plus
CG15510-RC 582 CG15510-PC 205..579 431..805 1845 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-RB 1053 CG15510-RB 157..945 17..805 3870 99.4 Plus
CG15510-RD 769 CG15510-RD 1..661 145..805 3275 99.7 Plus
CG15510-RC 745 CG15510-RC 263..637 431..805 1845 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29836886..29837263 407..784 1875 99.7 Plus
3R 32079331 3R 29836530..29836832 107..409 1470 99 Plus
3R 32079331 3R 29836106..29836198 17..109 465 100 Plus
Blast to na_te.dros performed 2014-11-28 13:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 1169..1237 697..765 138 66.7 Plus

BO34128.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:03 Download gff for BO34128.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..945 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:29 Download gff for BO34128.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..945 17..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:46 Download gff for BO34128.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..945 17..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:46 Download gff for BO34128.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29836106..29836197 17..108 100 -> Plus
3R 29836532..29836832 109..409 99 -> Plus
3R 29836889..29837262 410..783 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:29 Download gff for BO34128.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25661828..25661919 17..108 100 -> Plus
arm_3R 25662254..25662554 109..409 99 -> Plus
arm_3R 25662611..25662984 410..783 99 -> Plus

BO34128.pep Sequence

Translation from 16 to 823

> BO34128.pep
MANVKIQAPTFGAGEQVSLGGQGLTDIPSTRHANIISVKIRFRVKTVTGA
FWEIQSLHKIQRMGRKRGRKEYCPPIYKRQKVARVTNNGYLNFMTEYKKR
FYGLSPQDMVHYAAKQWTQLSMAEKEAFKSKKPSTITLKSPAQYVACEMK
SDVAGGQQSSCQRQSPSARLRESERRSSRSKTLCRSAKNRQRGKPKPQQS
KRRLSHMGSAVAYIHFLRKFQRKNTELRTIDLLKTATRLWCRLPERHRHA
FERPLWIVTIGKSASFLDH

BO34128.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-PD 201 CG15510-PD 1..201 63..263 1057 100 Plus
CG15510-PB 201 CG15510-PB 1..201 63..263 1057 100 Plus
CG15510-PC 193 CG15510-PC 1..193 63..263 999 96 Plus