Clone BO34129 Report

Search the DGRC for BO34129

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG42523-RA
Protein status:BO34129.pep: Imported from assembly
Sequenced Size:586

Clone Sequence Records

BO34129.complete Sequence

586 bp assembled on 2013-05-14

GenBank Submission: KX794528

> BO34129.complete
GAAGTTATCAGTCGACATGAACTTCAAGGCTCGTTATTCGAAATCTGTAA
GTCCACCGAAGCGAGTAGGAATATCCCTCGAGGATCCTGTGTCCAGCTGC
GATGAGTTTCCCAGACCCCTGGGTCCGATGTTGAAATACATAGCCCTGTC
TCCGAATTATCAGATGCCCAGGAGAAAAGCTCCTCTAAATAGGGCCAATG
TGCCAAAAACAAACCGGGCCAGAAAATCTGGAAAAAAACACAAGATGCAC
TTATCCAAGGCATCGACTTACGGCCGAAAGCGCCCTGCCAGAAAAGTCAC
AAAAAGGCGAGATGTGATCAACAAGAAACCCAGAAAATCGAAAGGCACCA
AGATCATTGGTGGGGAGGAGAAGCCCATAGAATCCAATAGTAGACCCTGG
TGGAAATTGTTGTTTAGCAGAAAGCAGAATGACGAAAAAACACAGCAAGA
TAACATATCCTGCAATGTTTTGATGACCGACAGGTCAACCCAAACGATTG
TCAGTCCTCAATGTAATAATATTGATGACGATAAACTTGCACCATTTGAC
AAGCCAAATAAATACATTGCAAGCTTTCTAGACCAT

BO34129.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-RB 555 CG42523-PB 1..552 17..568 2760 100 Plus
CG42523-RA 555 CG42523-PA 1..552 17..568 2760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-RB 995 CG42523-RB 87..638 17..568 2760 100 Plus
CG42523-RA 643 CG42523-RA 87..638 17..568 2760 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4762981..4763532 17..568 2760 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:34:01 has no hits.

BO34129.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:05 Download gff for BO34129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 45..596 17..570 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:32 Download gff for BO34129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 87..638 17..570 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:48 Download gff for BO34129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 87..638 17..570 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:48 Download gff for BO34129.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4762981..4763532 17..570 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:32 Download gff for BO34129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4762981..4763532 17..570 99   Plus

BO34129.pep Sequence

Translation from 16 to 586

> BO34129.pep
MNFKARYSKSVSPPKRVGISLEDPVSSCDEFPRPLGPMLKYIALSPNYQM
PRRKAPLNRANVPKTNRARKSGKKHKMHLSKASTYGRKRPARKVTKRRDV
INKKPRKSKGTKIIGGEEKPIESNSRPWWKLLFSRKQNDEKTQQDNISCN
VLMTDRSTQTIVSPQCNNIDDDKLAPFDKPNKYIASFLDH

BO34129.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-PB 184 CG42523-PB 1..184 1..184 975 100 Plus
CG42523-PA 184 CG42523-PA 1..184 1..184 975 100 Plus