BO34132.complete Sequence
1420 bp assembled on 2013-05-14
GenBank Submission: KX795047
> BO34132.complete
GAAGTTATCAGTCGACATGGCTCCTAAGAAGCATAGTGGGTTTATGATGT
TCGTAAACGAGTGGAGAAACCGGAACGCCGAGGGCCGACGCATGACGCTG
GCGCAGGCTGTTTCCCACTGCGGCACCATATGGGAGCCTTTTCAGAAAAT
GAACACCCAGCAGCGTGGTCCGTACAACTCAGGCGGCAAGGACGCAAATG
TGGCGCAACGCGCCAAAAGGGAAAGTTCCAACGGCCACGGCCAGGTGGAC
AAGGCCCAAAGGGAGGCCACCGAGAGCTTGATGGACATGAAACGTACCAT
CGAGCGCCTCGTGCTAAACGCCAAGATGTCCCATGATCTGGAGAATGCCA
AGTTTGTCTTCGTTGCCTTCAACTACTTCACTAAAGCCTTGACCACCGAC
GTCTATGTGCCCGCCGAGTTTGCGGCATGCGAATATTCGTTGAAGGAGGG
AATCCGATCCATCTACAGCACCATGATTGACCCCGGTCAGATCATTTTTG
GGCAAGGTAGCGATGCCCTGCTTCACTCTTCAACCACTCACGACCTGCCG
CTGCCGCCCAACGCGCTGGGGGAGAAGAACATGACCAAGCTGTACCGCAA
CATTGTTGACTACTTATCCAAATGCCAGGGAAAAGGCAAGACCCTAGTAG
TCTTTACACCCGCCGAAAATATTACCATGGTGAAGTCATGCTTCCGCTAT
TTGGAGTGCGATGATGACTTCAGGGACGGGGGCGAAAAAATCCAGGTGTT
TGATATCCAGTACTTGCTATTCATATTGAAGAAGGAGGTCATGAATGTCG
CTGATTTGAATGACGAGAAAATCAACAAATTCGCGACGGATGCTTTTTTT
AAGAAAGACTTTTTCGAGTTTACCGCAGGGATTGCGTGTCAGTACCACGA
GGATAATGATCGAACCAAGTACTGTACCCAGAGTATGGTGACTAGATGGG
CGTATACCTTCACTGATTTTATGTGCGGAGACCTGGCCATAACCGTCCAA
CCCGGAAAGCACATACCTGCCCAAACAAAACCCAACTACCTTATCATAAG
CTCGTACGCCTCCTCACTCGACCACGAGTCCTCCTTCGACTCTTTTTATT
CGCTTCCCGGATCTGGGGTCAAGAAGGAAAGCCAACCCGAAGCTTGTTCG
CTTTCTAGCAGTCGACTTTCCGTCGCATCAAGCTCCTACAAGCCCATAGA
CCACACTTCCTTTGCCGCAAATTTAAACGAAGTTTCTGAATTCCCCAGCC
TCGGCATGCGTAATTCTAGTAAGCATCACGGTATCGCCGCTAGTGCTCAG
CGGGAATGGAACGCTAGGAACTTACCGACGCACTCGCGTTTAATTCGGAA
GGTTTCAGACAACGACTTCTCCGTAAACGGCGCTGATGGGAAACTTAAAA
AAGCAAGCTTTCTAGACCAT
BO34132.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mael-RC | 1389 | CG11254-PC | 1..1386 | 17..1402 | 6930 | 100 | Plus |
| mael-RD | 1380 | CG11254-PD | 1..1377 | 17..1402 | 6760 | 99.4 | Plus |
| mael-RB | 1380 | CG11254-PB | 1..1377 | 17..1402 | 6760 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mael-RC | 1839 | CG11254-RC | 334..1719 | 17..1402 | 6930 | 100 | Plus |
| mael-RD | 2143 | CG11254-RD | 647..2023 | 17..1402 | 6760 | 99.4 | Plus |
| mael-RB | 1830 | CG11254-RB | 334..1710 | 17..1402 | 6760 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22724985..22725542 | 335..892 | 2790 | 100 | Plus |
| 3L | 28110227 | 3L | 22725602..22726114 | 890..1402 | 2565 | 100 | Plus |
| 3L | 28110227 | 3L | 22724729..22724929 | 135..335 | 1005 | 100 | Plus |
| 3L | 28110227 | 3L | 22724566..22724685 | 17..136 | 600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:34:05 has no hits.
BO34132.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:07 Download gff for
BO34132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mael-RC | 333..1712 | 17..1396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:35 Download gff for
BO34132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mael-RC | 334..1713 | 17..1396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:50 Download gff for
BO34132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mael-RC | 334..1713 | 17..1396 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:50 Download gff for
BO34132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22724566..22724685 | 17..136 | 100 | -> | Plus |
| 3L | 22724731..22724929 | 137..335 | 100 | -> | Plus |
| 3L | 22724986..22725542 | 336..892 | 100 | -> | Plus |
| 3L | 22725605..22726108 | 893..1396 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:35 Download gff for
BO34132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22717666..22717785 | 17..136 | 100 | -> | Plus |
| arm_3L | 22717831..22718029 | 137..335 | 100 | -> | Plus |
| arm_3L | 22718086..22718642 | 336..892 | 100 | -> | Plus |
| arm_3L | 22718705..22719208 | 893..1396 | 100 | | Plus |
BO34132.pep Sequence
Translation from 16 to 1420
> BO34132.pep
MAPKKHSGFMMFVNEWRNRNAEGRRMTLAQAVSHCGTIWEPFQKMNTQQR
GPYNSGGKDANVAQRAKRESSNGHGQVDKAQREATESLMDMKRTIERLVL
NAKMSHDLENAKFVFVAFNYFTKALTTDVYVPAEFAACEYSLKEGIRSIY
STMIDPGQIIFGQGSDALLHSSTTHDLPLPPNALGEKNMTKLYRNIVDYL
SKCQGKGKTLVVFTPAENITMVKSCFRYLECDDDFRDGGEKIQVFDIQYL
LFILKKEVMNVADLNDEKINKFATDAFFKKDFFEFTAGIACQYHEDNDRT
KYCTQSMVTRWAYTFTDFMCGDLAITVQPGKHIPAQTKPNYLIISSYASS
LDHESSFDSFYSLPGSGVKKESQPEACSLSSSRLSVASSSYKPIDHTSFA
ANLNEVSEFPSLGMRNSSKHHGIAASAQREWNARNLPTHSRLIRKVSDND
FSVNGADGKLKKASFLDH
BO34132.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mael-PC | 462 | CG11254-PC | 1..462 | 1..462 | 2427 | 100 | Plus |
| mael-PD | 459 | CG11254-PD | 1..459 | 1..462 | 2395 | 99.4 | Plus |
| mael-PB | 459 | CG11254-PB | 1..459 | 1..462 | 2395 | 99.4 | Plus |
| mael-PA | 459 | CG11254-PA | 1..459 | 1..462 | 2395 | 99.4 | Plus |
