BO34134.complete Sequence
916 bp assembled on 2013-05-14
GenBank Submission: KX794452
> BO34134.complete
GAAGTTATCAGTCGACATGGGCAAGGATCAGCATTTGCTGGAGGCTTCGC
GAGCCGGCGACATCAAGACGGTGGACAAACTGCTGGAGCACTCGAGCAAA
CGACATGGCCCGCTGTCCAGTTTTAGGCGAAGTCCCAGCATCAACTGCCA
GGACATGAATGGCTACACTTCGCTGCATCACGCCTGTCTAAATGGGCATA
GCAACATTGTACGGCTACTACTCTCCCACAACGCGCTGTTGGATGTGCCT
GATATACGTGGCTCGACACCTTTATTTCTGGCTGCCTGGGCTGGGCACCA
GGACATCGTCAAGATGCTGTTGATGCACTCGCCTACGGGAGCCAATCCGA
ATGCCCAGACTATCGAAAACGAGACGCCGCTGCACTCAGGCGCCCAACAT
GGCCACAATGCCGTGGTGGCCATTTTGCTGTCCTATGGCGCCGATCCTGC
CATACGCAACAATAGCTTTCAAACGGCTCTGGATTTGGCAGCGCAATTCG
GACGCCTTCAGGTGGTTCAGACCTTGCTCCGTGTTTATCCCGACCTCATA
TTGCCGTATAAGCGTTTGGAAGATGACAATGAAGAGCTGCTGGGCTGCAT
GCCCATAAAGCACATATTCACGCACACCTGCCTGCACCTGGCCAGCAGGA
ATGGGCACAAGAAGGTGGTGGAAACACTGCTGGCGGCCGGCGTCGATGTC
AACATACTCACCAACGCTGGAAGCGCTCTCCACGAGGCGGCTCTCTGTGG
CAAAAAGTCCGTTGTGGTCACTCTGCTTAAGGCCGGTATCTACGTACACG
CCACCGATGGAAACGGACGCACAGCCCTGGACATACTCTCCGATTACCCG
CCGCATGTGACCTACGACATTGTGGGCGCCATAAACGGTGCGTACGAGGC
AAGCTTTCTAGACCAT
BO34134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11168-RE | 2550 | CG11168-PE | 1..871 | 17..887 | 4340 | 99.9 | Plus |
| CG11168-RD | 2592 | CG11168-PD | 1..871 | 17..887 | 4340 | 99.9 | Plus |
| CG11168-RC | 999 | CG11168-PC | 1..871 | 17..887 | 4340 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11168-RE | 2903 | CG11168-RE | 155..1025 | 17..887 | 4340 | 99.9 | Plus |
| CG11168-RD | 2945 | CG11168-RD | 155..1025 | 17..887 | 4340 | 99.9 | Plus |
| CG11168-RC | 3249 | CG11168-RC | 190..1060 | 17..887 | 4340 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24918814..24919594 | 118..898 | 3890 | 99.9 | Plus |
| 3R | 32079331 | 3R | 24918652..24918755 | 17..120 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:33:51 has no hits.
BO34134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:01 Download gff for
BO34134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11168-RB | 150..1031 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:26 Download gff for
BO34134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11168-RC | 190..1067 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:44 Download gff for
BO34134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11168-RC | 190..1067 | 17..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:44 Download gff for
BO34134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24918652..24918755 | 17..120 | 100 | -> | Plus |
| 3R | 24918817..24919594 | 121..900 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:26 Download gff for
BO34134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20744374..20744477 | 17..120 | 100 | -> | Plus |
| arm_3R | 20744539..20745316 | 121..900 | 99 | | Plus |
BO34134.pep Sequence
Translation from 16 to 916
> BO34134.pep
MGKDQHLLEASRAGDIKTVDKLLEHSSKRHGPLSSFRRSPSINCQDMNGY
TSLHHACLNGHSNIVRLLLSHNALLDVPDIRGSTPLFLAAWAGHQDIVKM
LLMHSPTGANPNAQTIENETPLHSGAQHGHNAVVAILLSYGADPAIRNNS
FQTALDLAAQFGRLQVVQTLLRVYPDLILPYKRLEDDNEELLGCMPIKHI
FTHTCLHLASRNGHKKVVETLLAAGVDVNILTNAGSALHEAALCGKKSVV
VTLLKAGIYVHATDGNGRTALDILSDYPPHVTYDIVGAINGAYEASFLDH
BO34134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11168-PC | 332 | CG11168-PC | 1..296 | 1..296 | 1512 | 98.3 | Plus |
| CG11168-PE | 849 | CG11168-PE | 1..296 | 1..296 | 1512 | 98.3 | Plus |
| CG11168-PD | 863 | CG11168-PD | 1..296 | 1..296 | 1512 | 98.3 | Plus |
| CG11168-PA | 863 | CG11168-PA | 1..296 | 1..296 | 1512 | 98.3 | Plus |
| CG4393-PD | 1325 | CG4393-PD | 1..293 | 1..290 | 866 | 59.4 | Plus |
