BO34138.complete Sequence
586 bp assembled on 2013-05-14
GenBank Submission: KX796076
> BO34138.complete
GAAGTTATCAGTCGACATGCGGAAGGTGCAGGCTTTGGTTCAGACGCGCG
ACGGCAAGAAGACCGTCTACGAGGTGGATCGCTTAGGAACGGTGGCCAGC
CTGAAGGCACGGATCGGGCAAGCCATGTCCGTGCCCATGGGCTTCAGTCG
GCTGTCGTACAAGGGTCGCGTGCTATCCAATCAGAGCGTACTGGAGGATT
TGGGGCCCAATAAGTCCACCCTGGATCTCACCTGGAAGCCGGTCGTCCTG
ACGGCCAATCAGAGCAGCAAGTTAAGCAAGTTCGGCTATGGCAGGATAGA
CGATAGTGAAGTTATGTTTACACTGATCGGCGGCTACCAGCAACGCGAAG
AATATCCTGGTGGCATAGTCAATCCACCGGACGACGAAAGTCAACAAAAC
TTCAACGCAGGTGACGATGATGATGCACTGGAGGCCCAGGACATGACTGG
ACACGATTTGTCCTCAATTCAAACCGATGATTTATCGCTCAAAGGCCAGA
CGGAACCGGAGCTGGATTGCTCCATTGGATCTCATGGATTCTCTGGATCT
CAAGAAGAAGGCCAAGAAGCAAGCTTTCTAGACCAT
BO34138.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33223-RB | 555 | CG33223-PB | 1..552 | 17..568 | 2760 | 100 | Plus |
CG33223-RA | 555 | CG33223-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
CG32713-RB | 555 | CG32713-PB | 1..552 | 17..568 | 2625 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33223-RB | 689 | CG33223-RB | 67..618 | 17..568 | 2760 | 100 | Plus |
CG33223-RA | 1114 | CG33223-RA | 492..1043 | 17..568 | 2760 | 100 | Plus |
CG32713-RB | 796 | CG32713-RB | 73..624 | 17..568 | 2625 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8465761..8466312 | 568..17 | 2760 | 100 | Minus |
X | 23542271 | X | 8457009..8457560 | 568..17 | 2625 | 98.4 | Minus |
X | 23542271 | X | 13402370..13402714 | 346..17 | 810 | 84.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:34:18 has no hits.
BO34138.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:12 Download gff for
BO34138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33223-RA | 492..1043 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:41 Download gff for
BO34138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33223-RA | 492..1043 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:56 Download gff for
BO34138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33223-RA | 492..1043 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:56 Download gff for
BO34138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8465759..8466312 | 17..570 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:41 Download gff for
BO34138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8359792..8360345 | 17..570 | 99 | | Minus |
BO34138.pep Sequence
Translation from 16 to 586
> BO34138.pep
MRKVQALVQTRDGKKTVYEVDRLGTVASLKARIGQAMSVPMGFSRLSYKG
RVLSNQSVLEDLGPNKSTLDLTWKPVVLTANQSSKLSKFGYGRIDDSEVM
FTLIGGYQQREEYPGGIVNPPDDESQQNFNAGDDDDALEAQDMTGHDLSS
IQTDDLSLKGQTEPELDCSIGSHGFSGSQEEGQEASFLDH
BO34138.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33223-PB | 184 | CG33223-PB | 1..184 | 1..184 | 945 | 100 | Plus |
CG33223-PA | 184 | CG33223-PA | 1..184 | 1..184 | 945 | 100 | Plus |
CG32713-PB | 184 | CG32713-PB | 1..184 | 1..184 | 923 | 97.3 | Plus |
CG32713-PA | 184 | CG32713-PA | 1..184 | 1..184 | 923 | 97.3 | Plus |
CG12725-PA | 163 | CG12725-PA | 1..162 | 1..178 | 461 | 60.3 | Plus |