BO34140.complete Sequence
907 bp assembled on 2013-05-14
GenBank Submission: KX795608
> BO34140.complete
GAAGTTATCAGTCGACATGCTCAACTCTTTGGCCAAGAGAATTGTGCTTA
TGCCCAGCCTTATAGCACTGGAGGATACTTGTCGAACTATTCACGTTACC
GCCCTAATGGCGAGGATGGGAAAGGATTTCTGTCCCGTGAGTGAGGTTCC
CGACTGCAAAGTGGTGAAGAAGCGACCGTGCAGTCCCACGGATCCACCTG
TTCGTCCTTGCAGCGAGGAGGGCTGCACCCAGCCGCGATACTCATGTTGC
GTGAGTACCGGCATTTCGGCGAATCCATGCGCTGATCCAAGCAAGAAGAC
CAAGTTCGTTTCGATGTGGAAGAGATACAAGGATGATGGTAGTAATCGGC
CAGAAGCTATGTGGCACTACCCGGAGGAGTGCTGTCCAAAGTGTGAGGAT
ACGCGATTTGACGTTTTGTACTATACACCGTCGGACAAGTGCCGGGAGTT
CCAGCGCACCTGGTGGGAATGCTGTCCAAAAATGGTACCGAAGCGGGTCT
GCTGCTGGTGCGACGCCATTCCACCGGAGGTCCTGCGGCGAGATTTGCCC
ATCTGCCCGCGATCCGCTTGTCTCGCAGAACATGAGAGGAAGCGCTATAA
GTGCCTAAACAAAAGGTACAAAGGTTGCATGCGTATCCGTATGCCGTGTT
GTCGAACCGCTCGAATACCGCCCGACTGCAGGGCATTCCCCGGTCCTTCC
GATTGCGAGAAGATCAAGTGCCCGTTCCCGAGTTACTCCGAATGCGTTCA
GGAGGATCCCGCTGTTATCCCAACCCGGCCACCAGAGTGTGAGTGCTTGA
AAAAGGCGTCTCAGTGCGAGCAGATCCGACGAGGACGGCACATGGAAAAC
AACGACATAAGCATCTGGCCGTGTACTTCCAGGGGAAGAGCAAGCTTTCT
AGACCAT
BO34140.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hubl-RB | 876 | CG30364-PB | 1..873 | 17..889 | 4365 | 100 | Plus |
hubl-RA | 876 | CG30364-PA | 1..873 | 17..889 | 4365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
spaw-RB | 2691 | CG30365-RB | 57..930 | 16..889 | 4370 | 100 | Plus |
hubl-RB | 2691 | CG30364-RB | 57..930 | 16..889 | 4370 | 100 | Plus |
hubl-RA | 1061 | CG30364-RA | 57..930 | 16..889 | 4370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8361227..8362100 | 889..16 | 4370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:34:22 has no hits.
BO34140.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:14 Download gff for
BO34140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hubl-RA | 58..930 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:43 Download gff for
BO34140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
spaw-RB | 58..930 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:58 Download gff for
BO34140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hubl-RA | 58..930 | 17..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:58 Download gff for
BO34140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8361224..8362099 | 17..891 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:43 Download gff for
BO34140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4248729..4249604 | 17..891 | 99 | | Minus |
BO34140.pep Sequence
Translation from 16 to 907
> BO34140.pep
MLNSLAKRIVLMPSLIALEDTCRTIHVTALMARMGKDFCPVSEVPDCKVV
KKRPCSPTDPPVRPCSEEGCTQPRYSCCVSTGISANPCADPSKKTKFVSM
WKRYKDDGSNRPEAMWHYPEECCPKCEDTRFDVLYYTPSDKCREFQRTWW
ECCPKMVPKRVCCWCDAIPPEVLRRDLPICPRSACLAEHERKRYKCLNKR
YKGCMRIRMPCCRTARIPPDCRAFPGPSDCEKIKCPFPSYSECVQEDPAV
IPTRPPECECLKKASQCEQIRRGRHMENNDISIWPCTSRGRASFLDH
BO34140.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hubl-PB | 291 | CG30364-PB | 1..291 | 1..291 | 1676 | 100 | Plus |
hubl-PA | 291 | CG30364-PA | 1..291 | 1..291 | 1676 | 100 | Plus |
swif-PB | 284 | CG30366-PB | 37..279 | 54..272 | 293 | 31 | Plus |
swif-PA | 284 | CG30366-PA | 37..279 | 54..272 | 293 | 31 | Plus |
CG2127-PB | 289 | CG2127-PB | 51..267 | 66..268 | 258 | 33.6 | Plus |