BO34144.complete Sequence
265 bp assembled on 2013-05-22
GenBank Submission: KX798045
> BO34144.complete
GAAGTTATCAGTCGACATGATTTGCGTATCACGTCTGGTCATCATCAATT
TGCCCAGTGTCTGGTCATCCAAGAGATCCAAAGACTCGGAGGAAAAGGAT
AGCAAAGATTCTGTAAAGCCAGCTGCACCCAGGGATTTTCAGAGACCTTT
GCAGATCCACACAAAAAGGGGCTACATCAAGTGGTTCAACAAGCTGAGTC
GCTGCCACAAAACTCGTCATTTTTCAGGCAGAATGCATCCCAGGCTGGCA
AGCTTTCTAGACCAT
BO34144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43059-RA | 234 | CG43059-PA | 1..231 | 17..247 | 1140 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43059-RA | 377 | CG43059-RA | 99..329 | 17..247 | 1140 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8318590..8318731 | 247..106 | 695 | 99.3 | Minus |
3L | 28110227 | 3L | 8318778..8318868 | 107..17 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:42:57 has no hits.
BO34144.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 11:24:05 Download gff for
BO34144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43059-RA | 99..329 | 17..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:59 Download gff for
BO34144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43059-RA | 99..329 | 17..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:25 Download gff for
BO34144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43059-RA | 99..329 | 17..249 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:25 Download gff for
BO34144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8318778..8318868 | 17..107 | 100 | | Minus |
3L | 8318588..8318729 | 108..249 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:59 Download gff for
BO34144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8311688..8311829 | 108..249 | 97 | <- | Minus |
arm_3L | 8311878..8311968 | 17..107 | 100 | | Minus |
BO34144.pep Sequence
Translation from 16 to 265
> BO34144.pep
MICVSRLVIINLPSVWSSKRSKDSEEKDSKDSVKPAAPRDFQRPLQIHTK
RGYIKWFNKLSRCHKTRHFSGRMHPRLASFLDH
BO34144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43059-PA | 77 | CG43059-PA | 1..77 | 1..77 | 414 | 100 | Plus |