Clone BO34145 Report

Search the DGRC for BO34145

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG43121-RA
Protein status:BO34145.pep: Imported from assembly
Sequenced Size:385

Clone Sequence Records

BO34145.complete Sequence

385 bp assembled on 2013-05-14

GenBank Submission: KX797035

> BO34145.complete
GAAGTTATCAGTCGACATGCTTTCCCCGGAGTCTCCGGAGAAACCGAAAA
AAAGTCTACATGACCTCGGGCTATTAACAAAGACTGAAGAGAAAACCAAA
GGGAGCCTTGTAGCCCTCCAGTCTATCGACAAGCGCCTGAAGACCCTCTT
GGACCGCCTTACATCTGTGGAGAACTCAATGGCTAGCTTGAATTTACCTG
CTTTGGACGAAGGTAATGGAGACACCTATGAGGACTTGGAAACATTGGAG
GATGAGTTGGACAACCAGGAGAAAGAACTTTCAGAATTTGCAAATGAAGA
AGCTATTGGGTCAAAGGTAGATGATGATGAAATTGAAGAGGTAGACAAGG
AAGTCACAGGAAATCAAGCAAGCTTTCTAGACCAT

BO34145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-RA 354 CG43121-PA 1..351 17..367 1755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-RA 503 CG43121-RA 38..388 17..367 1755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14672050..14672400 367..17 1755 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:34:30 has no hits.

BO34145.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:17 Download gff for BO34145.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..388 17..369 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:47 Download gff for BO34145.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..388 17..369 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:01 Download gff for BO34145.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..388 17..369 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:01 Download gff for BO34145.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14672048..14672400 17..369 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:47 Download gff for BO34145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14665148..14665500 17..369 99   Minus

BO34145.pep Sequence

Translation from 16 to 385

> BO34145.pep
MLSPESPEKPKKSLHDLGLLTKTEEKTKGSLVALQSIDKRLKTLLDRLTS
VENSMASLNLPALDEGNGDTYEDLETLEDELDNQEKELSEFANEEAIGSK
VDDDEIEEVDKEVTGNQASFLDH

BO34145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-PA 117 CG43121-PA 1..117 1..117 582 100 Plus