Clone BO34146 Report

Search the DGRC for BO34146

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG43068-RA
Protein status:BO34146.pep: Imported from assembly
Sequenced Size:658

Clone Sequence Records

BO34146.complete Sequence

658 bp assembled on 2013-05-14

GenBank Submission: KX797416

> BO34146.complete
GAAGTTATCAGTCGACATGCCTGGACAATACACCAACTACAAGTGCACTC
GATTTATAATGACGGTGCTCCGGTCGTATCTGAGCATACTCTACCTATGG
GGAATTTTGCAATTGGCTGCCATCATTCCGGTTCCCTGTGAGATCTGGGA
GACAACATTCTTGTTCGCAACAAGGTCCTTTAAAGTTGCCTACGAGTCGT
TTTTTACTAATGATCTGGCGATGTCGGTGTGTATTTGCGTCATGATCCTC
GGTGTGCTGATCTATCTGTACCACTGCTGTCGGTGCAGACTACTTGGAGC
CCGAACTTGGGGCCCAGGAGCGGCTAGGCCGCGCATGAATACACCCATTC
TGATCTTGACGATACCCTATATCGCAGTCTTCGTCGTTTCCTGGGTAATC
ACCACCAACGCCACGTATCGCGGCATCATCTTTGTGGCTGAGAATGAAGT
GGGTGACCAAAGCGGCAGGGCGATTTTTCTATTGGTCATCGGTCTGCTAA
TGAAGCTTCTAGTTTTGGCCAATTTCTATTCGGTTTGCATACGCATCTGG
GCTTACTTAAATATCTTGAATATTGGCTCGAATGATTGGCTAGTGAACAA
CTACAATTTTGGCGATCACCTCAATTTGTTCTTTTGCGTTGCAAGCTTTC
TAGACCAT

BO34146.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG43068-RA 627 CG43068-PA 1..624 17..640 3120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG43068-RA 795 CG43068-RA 120..743 17..640 3120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15185277..15185900 17..640 3120 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:34:09 has no hits.

BO34146.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:09 Download gff for BO34146.complete
Subject Subject Range Query Range Percent Splice Strand
CG43068-RA 120..743 17..642 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:37 Download gff for BO34146.complete
Subject Subject Range Query Range Percent Splice Strand
CG43068-RA 120..743 17..642 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:52 Download gff for BO34146.complete
Subject Subject Range Query Range Percent Splice Strand
CG43068-RA 120..743 17..642 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:52 Download gff for BO34146.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15185277..15185900 17..642 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:37 Download gff for BO34146.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11072782..11073405 17..642 99   Plus

BO34146.pep Sequence

Translation from 16 to 658

> BO34146.pep
MPGQYTNYKCTRFIMTVLRSYLSILYLWGILQLAAIIPVPCEIWETTFLF
ATRSFKVAYESFFTNDLAMSVCICVMILGVLIYLYHCCRCRLLGARTWGP
GAARPRMNTPILILTIPYIAVFVVSWVITTNATYRGIIFVAENEVGDQSG
RAIFLLVIGLLMKLLVLANFYSVCIRIWAYLNILNIGSNDWLVNNYNFGD
HLNLFFCVASFLDH

BO34146.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG43068-PA 208 CG43068-PA 1..208 1..208 1109 100 Plus