Clone BO34150 Report

Search the DGRC for BO34150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG31473-RA
Protein status:BO34150.pep: Imported from assembly
Sequenced Size:791

Clone Sequence Records

BO34150.complete Sequence

791 bp assembled on 2013-05-14

> BO34150.complete
GAAGTTATCAGGCGACATGTCGACTGTTTTGGCACAAAAGCTGTGGTGTA
CGCTTTGGTCAGCAGGATCACTAGGTCGCTTTGCACAGCACATGAGCAAC
GCTGCCCACCAGGTGAGCTGTATAGGCAGCGAGGAGCAGCGGGTGTACGA
GGAGCCACACGTAATCTTCCAGAACTGGCTGATGGCCGCCCAGAAGGAGG
CTCCTCAGGTGCGGCCTCGACTGGCCTGCATGGCCACGGTGGACAAGTCC
GGTGAGCCTGTGACCCGCCTAACCAGCATCGAGGAGGTCAATTCCCATGG
AATCACCTTCTTCACAACCCTCGGCAGTCGGCAGGCGGGCGAGATAAGCG
CCAATCCTCACGTGTCGCTACACTTCAACTGGGCGCCGCTCATGCGCAGT
GTTCGCATAGCAGGATCTGCTCACCAGCTAACGGAGGAGCAGGTTCGGGA
CCAGTTCCGACGATTTCCGCGCCACGTCCAGATGAGCATCACCCATGGAC
CACGATACGCTGCGGCCGAGTGGCAATCCCGATCCGGGTTCTTTGCGCGG
ATCGGACAGCGCTTGAACACCTGGCTTGGCAAGCAACCGGAGGAGATCCC
CATGCCGCACAACTGGGGAGGCTATATTCTTACACCCAGCCTATACGAAT
TCGGAATGCTAAGCGGCGAGAAGGCCGGTAGGACTCGGGTGCGATTCCGA
CGGTGTCTTGAAATGCCAAGGGGTACAAGAGTTGGTCACGTTCAAGCTGA
AAGGCAGGACTGGGTTTATGATTCGTGTGATGAAAATCCAA

BO34150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31473-RA 774 CG31473-PA 1..771 17..787 3855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31473-RA 981 CG31473-RA 83..853 17..787 3855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7811896..7812601 17..722 3530 100 Plus
3R 32079331 3R 7812815..7812881 721..787 335 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:34:52 has no hits.

BO34150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:26 Download gff for BO34150.complete
Subject Subject Range Query Range Percent Splice Strand
CG31473-RA 83..839 17..773 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:58 Download gff for BO34150.complete
Subject Subject Range Query Range Percent Splice Strand
CG31473-RA 83..839 17..773 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:10 Download gff for BO34150.complete
Subject Subject Range Query Range Percent Splice Strand
CG31473-RA 83..839 17..773 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:10 Download gff for BO34150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7811896..7812600 17..721 100 -> Plus
3R 7812816..7812867 722..773 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:58 Download gff for BO34150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3637618..3638322 17..721 100 -> Plus
arm_3R 3638538..3638589 722..773 100   Plus

BO34150.pep Sequence

Translation from 16 to 790

> BO34150.pep
MSTVLAQKLWCTLWSAGSLGRFAQHMSNAAHQVSCIGSEEQRVYEEPHVI
FQNWLMAAQKEAPQVRPRLACMATVDKSGEPVTRLTSIEEVNSHGITFFT
TLGSRQAGEISANPHVSLHFNWAPLMRSVRIAGSAHQLTEEQVRDQFRRF
PRHVQMSITHGPRYAAAEWQSRSGFFARIGQRLNTWLGKQPEEIPMPHNW
GGYILTPSLYEFGMLSGEKAGRTRVRFRRCLEMPRGTRVGHVQAERQDWV
YDSCDENP

BO34150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31473-PA 257 CG31473-PA 1..257 1..257 1381 100 Plus
sgll-PB 237 CG31472-PB 26..233 39..252 289 33.6 Plus
sgll-PA 246 CG31472-PA 35..242 39..252 289 33.6 Plus