BO34150.complete Sequence
791 bp assembled on 2013-05-14
> BO34150.complete
GAAGTTATCAGGCGACATGTCGACTGTTTTGGCACAAAAGCTGTGGTGTA
CGCTTTGGTCAGCAGGATCACTAGGTCGCTTTGCACAGCACATGAGCAAC
GCTGCCCACCAGGTGAGCTGTATAGGCAGCGAGGAGCAGCGGGTGTACGA
GGAGCCACACGTAATCTTCCAGAACTGGCTGATGGCCGCCCAGAAGGAGG
CTCCTCAGGTGCGGCCTCGACTGGCCTGCATGGCCACGGTGGACAAGTCC
GGTGAGCCTGTGACCCGCCTAACCAGCATCGAGGAGGTCAATTCCCATGG
AATCACCTTCTTCACAACCCTCGGCAGTCGGCAGGCGGGCGAGATAAGCG
CCAATCCTCACGTGTCGCTACACTTCAACTGGGCGCCGCTCATGCGCAGT
GTTCGCATAGCAGGATCTGCTCACCAGCTAACGGAGGAGCAGGTTCGGGA
CCAGTTCCGACGATTTCCGCGCCACGTCCAGATGAGCATCACCCATGGAC
CACGATACGCTGCGGCCGAGTGGCAATCCCGATCCGGGTTCTTTGCGCGG
ATCGGACAGCGCTTGAACACCTGGCTTGGCAAGCAACCGGAGGAGATCCC
CATGCCGCACAACTGGGGAGGCTATATTCTTACACCCAGCCTATACGAAT
TCGGAATGCTAAGCGGCGAGAAGGCCGGTAGGACTCGGGTGCGATTCCGA
CGGTGTCTTGAAATGCCAAGGGGTACAAGAGTTGGTCACGTTCAAGCTGA
AAGGCAGGACTGGGTTTATGATTCGTGTGATGAAAATCCAA
BO34150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31473-RA | 774 | CG31473-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31473-RA | 981 | CG31473-RA | 83..853 | 17..787 | 3855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7811896..7812601 | 17..722 | 3530 | 100 | Plus |
3R | 32079331 | 3R | 7812815..7812881 | 721..787 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:34:52 has no hits.
BO34150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:26 Download gff for
BO34150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31473-RA | 83..839 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:58 Download gff for
BO34150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31473-RA | 83..839 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:10 Download gff for
BO34150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31473-RA | 83..839 | 17..773 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:10 Download gff for
BO34150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7811896..7812600 | 17..721 | 100 | -> | Plus |
3R | 7812816..7812867 | 722..773 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:58 Download gff for
BO34150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3637618..3638322 | 17..721 | 100 | -> | Plus |
arm_3R | 3638538..3638589 | 722..773 | 100 | | Plus |
BO34150.pep Sequence
Translation from 16 to 790
> BO34150.pep
MSTVLAQKLWCTLWSAGSLGRFAQHMSNAAHQVSCIGSEEQRVYEEPHVI
FQNWLMAAQKEAPQVRPRLACMATVDKSGEPVTRLTSIEEVNSHGITFFT
TLGSRQAGEISANPHVSLHFNWAPLMRSVRIAGSAHQLTEEQVRDQFRRF
PRHVQMSITHGPRYAAAEWQSRSGFFARIGQRLNTWLGKQPEEIPMPHNW
GGYILTPSLYEFGMLSGEKAGRTRVRFRRCLEMPRGTRVGHVQAERQDWV
YDSCDENP
BO34150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31473-PA | 257 | CG31473-PA | 1..257 | 1..257 | 1381 | 100 | Plus |
sgll-PB | 237 | CG31472-PB | 26..233 | 39..252 | 289 | 33.6 | Plus |
sgll-PA | 246 | CG31472-PA | 35..242 | 39..252 | 289 | 33.6 | Plus |