BO34151.complete Sequence
355 bp assembled on 2013-05-14
GenBank Submission: KX797820
> BO34151.complete
GAAGTTATCAGTCGACATGTCCATCGTCCTTGATGTTATCCAACAAGTTG
TGTTGCAGAAAGCTTACGATCTAACATGCGAGGCAGCCATTTTAGCCTTG
AGAAAATGTGGCAAACTGAAAATAGAGGATGGTAAATCGAAAGCAAAGCG
TGAAAAGCCTCTACCTCCGGTCAAGCCTATTTCCCAGGAAGCGGTTTCAC
CAATGAAAGCTCCAACGATTCCCGAGGCTAACACCATTCCAAAATATACG
GGACGGGACATGCCTCGAAAGAACTTTGGCTCCATCGATCCCCCCCAATG
CTCCTGCATGCGTGTGTGCCGAGATAGTTACTTCTCTGCAAGCTTTCTAG
ACCAT
BO34151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33655-RB | 324 | CG33655-PB | 1..321 | 17..337 | 1605 | 100 | Plus |
| CG33655-RC | 123 | CG33655-PC | 1..123 | 17..135 | 520 | 96.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33655-RB | 2164 | CR33655-RB | 55..375 | 17..337 | 1605 | 100 | Plus |
| CG33655-RC | 2168 | CG33655-RC | 55..379 | 17..337 | 1530 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21319582..21319803 | 337..116 | 1110 | 100 | Minus |
| 2R | 25286936 | 2R | 21319861..21319963 | 119..17 | 500 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:34:57 has no hits.
BO34151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:28 Download gff for
BO34151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33655-RB | 55..375 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:01 Download gff for
BO34151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33655-RB | 55..375 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:12 Download gff for
BO34151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33655-RB | 55..375 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:12 Download gff for
BO34151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21319580..21319803 | 116..339 | 99 | <- | Minus |
| 2R | 21319865..21319963 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:01 Download gff for
BO34151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17207085..17207308 | 116..339 | 99 | <- | Minus |
| arm_2R | 17207370..17207468 | 17..115 | 100 | | Minus |
BO34151.pep Sequence
Translation from 16 to 355
> BO34151.pep
MSIVLDVIQQVVLQKAYDLTCEAAILALRKCGKLKIEDGKSKAKREKPLP
PVKPISQEAVSPMKAPTIPEANTIPKYTGRDMPRKNFGSIDPPQCSCMRV
CRDSYFSASFLDH
BO34151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33655-PB | 107 | CR33655-PB | 1..107 | 1..107 | 559 | 100 | Plus |
| CG33655-PC | 40 | CG33655-PC | 1..34 | 1..34 | 162 | 97.1 | Plus |
