BO34153.complete Sequence
832 bp assembled on 2013-05-22
GenBank Submission: KX794086
> BO34153.complete
GAAGTTATCAGTCGACATGTGGTATTCAACGGTTAGGAACCCAAGTATTG
CCCTCATCAAACAGGGCTACCATATTCTCGCCGAATACAATCTGGTGAAG
GAAGAGCTAAAGAACATCTATGCCATACCCAGTTACGCTTGTGGATTGCA
CTGGTTCGGCGTCATCTTTGTGCACAGTGGAATCTATGCGGGCAGCGTGT
TTCGCTTCTCCATTCTGCTGCCGGAAAATTTTCCGGCGGACATCAGCCTG
CCCACGGTGGTCTTCTCGACGGAGGTCCTACATCCGCACATCTGTCCGCA
GAATAAGACCCTCGATCTGGCGCATTTCCTGAACGAGTGGCGCAAGGATG
AGCACCACATCTGGCACGTGCTTCGCTATATCCAGGCTATTTTCGCGGAT
CCAGAGGGCAGTATTTGCACCGGACAATCCTCTTCGGGGGATCTCGTGAT
CATGGATGAGGTTAGAAACATGAATGCCTTGAATATGTTGGCCAAAAGCC
GGCCTGAATACATCAAACGAGTCCAGGAGCAAGCAATCTTGTCGAGAAAT
CTTATCTACGACCGACCACCAACGGAAGATCCGCACTATATTATCGTGGA
GCCCTATTGTGCGGAACGGCATCTGAAGTTCATGGACCAACTGAAGAGTC
CCTGTTGGAAGGAGGCCACTTCCATGGACTGCTCCCAGCCGTCGGAGTAC
CTGGGACACATCGATTCCTCGAGGCAGCTGGACGAGGAAGAGGCGAATCA
GGTGGAGAAGCTACATCGCGGACGTATTCCGGAACACCAGCGTGAAGAGT
CGGAAGTTTCCCTGGCAAGCTTTCTAGACCAT
BO34153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16894-RA | 801 | CG16894-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16894-RA | 1035 | CG16894-RA | 133..931 | 16..814 | 3995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:43:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20211689..20212487 | 814..16 | 3995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:43:04 has no hits.
BO34153.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 11:24:07 Download gff for
BO34153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16894-RA | 134..931 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:01 Download gff for
BO34153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16894-RA | 134..931 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:27 Download gff for
BO34153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16894-RA | 134..931 | 17..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:27 Download gff for
BO34153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20211685..20212486 | 17..816 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:01 Download gff for
BO34153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16099190..16099991 | 17..816 | 99 | | Minus |
BO34153.pep Sequence
Translation from 16 to 832
> BO34153.pep
MWYSTVRNPSIALIKQGYHILAEYNLVKEELKNIYAIPSYACGLHWFGVI
FVHSGIYAGSVFRFSILLPENFPADISLPTVVFSTEVLHPHICPQNKTLD
LAHFLNEWRKDEHHIWHVLRYIQAIFADPEGSICTGQSSSGDLVIMDEVR
NMNALNMLAKSRPEYIKRVQEQAILSRNLIYDRPPTEDPHYIIVEPYCAE
RHLKFMDQLKSPCWKEATSMDCSQPSEYLGHIDSSRQLDEEEANQVEKLH
RGRIPEHQREESEVSLASFLDH
BO34153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16894-PA | 266 | CG16894-PA | 1..266 | 1..266 | 1426 | 100 | Plus |
| cbx-PB | 244 | CG10536-PB | 16..209 | 11..211 | 492 | 45.5 | Plus |
| cbx-PA | 214 | CG10536-PA | 5..179 | 29..211 | 457 | 45.4 | Plus |
| cbx-PC | 183 | CG10536-PC | 5..148 | 29..211 | 360 | 39.9 | Plus |
