BO34155.complete Sequence
679 bp assembled on 2013-05-14
GenBank Submission: KX799717
> BO34155.complete
GAAGTTATCAGTCGACATGAGTAATCTGAAACAAAAGGATAGCAAGCCGG
AGGTGGCAGTAACAAAATCAGTGAAAACCTATAAAAAATCAATTGAATAT
GTTAATTCCGACGCCTCCGACATTGAAGAAGATATCAATAGGGCAGAGGA
CGAATACGCCTCATCGTCTGGCTTTGTTAATTTTCTGAGGGACTTTAAGA
AGCGCTACGGAGAATATTACTCGAATAACGAGATAAGACGGGCTGCTGAA
ACCCGATGGAACGAAATGTCATTCCGTCATCGATGCCAGTATTCTGCGGA
ACCATTGGACACTTTTCATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGC
GTTCTAGTGAGGGCGAGCACAGAATGCACTCTGAAATAAGTGGCTGCGCA
GACACTTTCTTCGGTGCCGGTGGCTCCAATAGCTGCACTCCAAGAAAGGA
GAACAAGTGTTCCAAGCCCAGGGTGCGGAAGAGTTGCCCCAAACCACGGG
CGAAAACCTCGAAGCAACGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGC
GCCCGACCCCGGAAGGCATGTCCCCGCCCCAGGAAGAAGATGGAATGCGG
CAAGGCGAAGGCAAAGCCAAGGTGTCTTAAGCCCAAGAGCTCCAAGCCCA
AGTGCTCGATGGCAAGCTTTCTAGACCAT
BO34155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst77F-RA | 648 | CG3354-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Mst77Y-9-RA | 645 | CG45769-PA | 1..639 | 17..658 | 2425 | 92.2 | Plus |
CG45764-RA | 645 | CG45764-PA | 1..639 | 17..658 | 2425 | 92.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst77F-RA | 1065 | CG3354-RA | 150..794 | 17..661 | 3225 | 100 | Plus |
Mst77Y-9-RA | 660 | CG45769-RA | 16..654 | 17..658 | 2425 | 92.2 | Plus |
CG45764-RA | 942 | CG45764-RA | 147..785 | 17..658 | 2425 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20817172..20817535 | 661..298 | 1820 | 100 | Minus |
3L | 28110227 | 3L | 20817596..20817878 | 299..17 | 1415 | 100 | Minus |
Y | 3667352 | Y | 3341184..3341540 | 298..658 | 1375 | 93.4 | Plus |
Y | 3667352 | Y | 3371242..3371596 | 300..658 | 1365 | 93.3 | Plus |
Ymm | 880023 | Ymm | 515762..516116 | 658..300 | 1365 | 93.3 | Minus |
Y | 3667352 | Y | 3289701..3290058 | 298..658 | 1350 | 92.2 | Plus |
Y | 3667352 | Y | 3358926..3359280 | 300..658 | 1350 | 93 | Plus |
Y | 3667352 | Y | 3285354..3285711 | 298..658 | 1335 | 92 | Plus |
Y | 3667352 | Y | 3302187..3302544 | 298..658 | 1335 | 92 | Plus |
Y | 3667352 | Y | 3336760..3337117 | 298..658 | 1335 | 92 | Plus |
Y | 3667352 | Y | 3332337..3332693 | 298..658 | 1330 | 92.5 | Plus |
Y | 3667352 | Y | 3293966..3294323 | 298..658 | 1320 | 91.7 | Plus |
Y | 3667352 | Y | 3350011..3350368 | 298..658 | 1320 | 91.7 | Plus |
Y | 3667352 | Y | 3354465..3354822 | 298..658 | 1320 | 91.7 | Plus |
Y | 3667352 | Y | 3297764..3298120 | 298..658 | 1315 | 92.2 | Plus |
Y | 3667352 | Y | 3327916..3328273 | 298..658 | 1305 | 91.4 | Plus |
Y | 3667352 | Y | 3319090..3319436 | 298..658 | 1135 | 88.9 | Plus |
Y | 3667352 | Y | 3323503..3323849 | 298..658 | 1135 | 88.9 | Plus |
Y | 3667352 | Y | 3336415..3336697 | 17..299 | 1100 | 92.6 | Plus |
Y | 3667352 | Y | 3289355..3289637 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3293621..3293903 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3301842..3302124 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3318745..3319027 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3323158..3323440 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3327571..3327853 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3349666..3349948 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3354120..3354402 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3358586..3358868 | 17..299 | 1085 | 92.2 | Plus |
Y | 3667352 | Y | 3370902..3371184 | 17..299 | 1085 | 92.2 | Plus |
Ymm | 880023 | Ymm | 516174..516456 | 299..17 | 1085 | 92.2 | Minus |
Y | 3667352 | Y | 3297419..3297701 | 17..299 | 1055 | 91.5 | Plus |
Y | 3667352 | Y | 3340839..3341121 | 17..299 | 1055 | 91.5 | Plus |
Y | 3667352 | Y | 3345262..3345544 | 17..299 | 1055 | 91.5 | Plus |
Y | 3667352 | Y | 3376297..3376579 | 17..299 | 1025 | 90.8 | Plus |
Y | 3667352 | Y | 3285012..3285291 | 17..299 | 1005 | 91.2 | Plus |
Y | 3667352 | Y | 3331995..3332274 | 17..299 | 1005 | 91.2 | Plus |
Y | 3667352 | Y | 3345663..3345944 | 374..658 | 1000 | 90.9 | Plus |
Y | 3667352 | Y | 3364784..3365040 | 402..658 | 985 | 92.2 | Plus |
Y | 3667352 | Y | 3376698..3376978 | 374..658 | 965 | 90.9 | Plus |
Y | 3667352 | Y | 3364536..3364742 | 17..226 | 715 | 90.5 | Plus |
Ymm | 880023 | Ymm | 579094..579274 | 658..477 | 635 | 91.2 | Minus |
U | 3151297 | U | 1324257..1324400 | 158..17 | 410 | 88.9 | Minus |
U | 3151297 | U | 973491..973559 | 658..590 | 315 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:35:02 has no hits.
BO34155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:29 Download gff for
BO34155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 173..817 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:02 Download gff for
BO34155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 150..794 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:14 Download gff for
BO34155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 150..794 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:14 Download gff for
BO34155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20817170..20817534 | 299..663 | 99 | <- | Minus |
3L | 20817597..20817878 | 17..298 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:02 Download gff for
BO34155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20810697..20810978 | 17..298 | 100 | | Minus |
arm_3L | 20810270..20810634 | 299..663 | 99 | <- | Minus |
BO34155.pep Sequence
Translation from 16 to 679
> BO34155.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSMASFLDH
BO34155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst77F-PA | 215 | CG3354-PA | 1..215 | 1..215 | 1152 | 100 | Plus |
Mst77Y-9-PA | 214 | CG45769-PA | 1..214 | 1..215 | 1000 | 88.4 | Plus |
CG45766-PA | 214 | CG45766-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
CG45764-PA | 214 | CG45764-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
CG45770-PA | 214 | CG45770-PA | 1..214 | 1..215 | 985 | 87 | Plus |