Clone BO34155 Report

Search the DGRC for BO34155

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptMst77F-RA
Protein status:BO34155.pep: Imported from assembly
Sequenced Size:679

Clone Sequence Records

BO34155.complete Sequence

679 bp assembled on 2013-05-14

GenBank Submission: KX799717

> BO34155.complete
GAAGTTATCAGTCGACATGAGTAATCTGAAACAAAAGGATAGCAAGCCGG
AGGTGGCAGTAACAAAATCAGTGAAAACCTATAAAAAATCAATTGAATAT
GTTAATTCCGACGCCTCCGACATTGAAGAAGATATCAATAGGGCAGAGGA
CGAATACGCCTCATCGTCTGGCTTTGTTAATTTTCTGAGGGACTTTAAGA
AGCGCTACGGAGAATATTACTCGAATAACGAGATAAGACGGGCTGCTGAA
ACCCGATGGAACGAAATGTCATTCCGTCATCGATGCCAGTATTCTGCGGA
ACCATTGGACACTTTTCATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGC
GTTCTAGTGAGGGCGAGCACAGAATGCACTCTGAAATAAGTGGCTGCGCA
GACACTTTCTTCGGTGCCGGTGGCTCCAATAGCTGCACTCCAAGAAAGGA
GAACAAGTGTTCCAAGCCCAGGGTGCGGAAGAGTTGCCCCAAACCACGGG
CGAAAACCTCGAAGCAACGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGC
GCCCGACCCCGGAAGGCATGTCCCCGCCCCAGGAAGAAGATGGAATGCGG
CAAGGCGAAGGCAAAGCCAAGGTGTCTTAAGCCCAAGAGCTCCAAGCCCA
AGTGCTCGATGGCAAGCTTTCTAGACCAT

BO34155.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-RA 648 CG3354-PA 1..645 17..661 3225 100 Plus
Mst77Y-9-RA 645 CG45769-PA 1..639 17..658 2425 92.2 Plus
CG45764-RA 645 CG45764-PA 1..639 17..658 2425 92.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-RA 1065 CG3354-RA 150..794 17..661 3225 100 Plus
Mst77Y-9-RA 660 CG45769-RA 16..654 17..658 2425 92.2 Plus
CG45764-RA 942 CG45764-RA 147..785 17..658 2425 92.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20817172..20817535 661..298 1820 100 Minus
3L 28110227 3L 20817596..20817878 299..17 1415 100 Minus
Y 3667352 Y 3341184..3341540 298..658 1375 93.4 Plus
Y 3667352 Y 3371242..3371596 300..658 1365 93.3 Plus
Ymm 880023 Ymm 515762..516116 658..300 1365 93.3 Minus
Y 3667352 Y 3289701..3290058 298..658 1350 92.2 Plus
Y 3667352 Y 3358926..3359280 300..658 1350 93 Plus
Y 3667352 Y 3285354..3285711 298..658 1335 92 Plus
Y 3667352 Y 3302187..3302544 298..658 1335 92 Plus
Y 3667352 Y 3336760..3337117 298..658 1335 92 Plus
Y 3667352 Y 3332337..3332693 298..658 1330 92.5 Plus
Y 3667352 Y 3293966..3294323 298..658 1320 91.7 Plus
Y 3667352 Y 3350011..3350368 298..658 1320 91.7 Plus
Y 3667352 Y 3354465..3354822 298..658 1320 91.7 Plus
Y 3667352 Y 3297764..3298120 298..658 1315 92.2 Plus
Y 3667352 Y 3327916..3328273 298..658 1305 91.4 Plus
Y 3667352 Y 3319090..3319436 298..658 1135 88.9 Plus
Y 3667352 Y 3323503..3323849 298..658 1135 88.9 Plus
Y 3667352 Y 3336415..3336697 17..299 1100 92.6 Plus
Y 3667352 Y 3289355..3289637 17..299 1085 92.2 Plus
Y 3667352 Y 3293621..3293903 17..299 1085 92.2 Plus
Y 3667352 Y 3301842..3302124 17..299 1085 92.2 Plus
Y 3667352 Y 3318745..3319027 17..299 1085 92.2 Plus
Y 3667352 Y 3323158..3323440 17..299 1085 92.2 Plus
Y 3667352 Y 3327571..3327853 17..299 1085 92.2 Plus
Y 3667352 Y 3349666..3349948 17..299 1085 92.2 Plus
Y 3667352 Y 3354120..3354402 17..299 1085 92.2 Plus
Y 3667352 Y 3358586..3358868 17..299 1085 92.2 Plus
Y 3667352 Y 3370902..3371184 17..299 1085 92.2 Plus
Ymm 880023 Ymm 516174..516456 299..17 1085 92.2 Minus
Y 3667352 Y 3297419..3297701 17..299 1055 91.5 Plus
Y 3667352 Y 3340839..3341121 17..299 1055 91.5 Plus
Y 3667352 Y 3345262..3345544 17..299 1055 91.5 Plus
Y 3667352 Y 3376297..3376579 17..299 1025 90.8 Plus
Y 3667352 Y 3285012..3285291 17..299 1005 91.2 Plus
Y 3667352 Y 3331995..3332274 17..299 1005 91.2 Plus
Y 3667352 Y 3345663..3345944 374..658 1000 90.9 Plus
Y 3667352 Y 3364784..3365040 402..658 985 92.2 Plus
Y 3667352 Y 3376698..3376978 374..658 965 90.9 Plus
Y 3667352 Y 3364536..3364742 17..226 715 90.5 Plus
Ymm 880023 Ymm 579094..579274 658..477 635 91.2 Minus
U 3151297 U 1324257..1324400 158..17 410 88.9 Minus
U 3151297 U 973491..973559 658..590 315 97.1 Minus
Blast to na_te.dros performed on 2014-11-28 13:35:02 has no hits.

BO34155.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:29 Download gff for BO34155.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 173..817 17..663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:02 Download gff for BO34155.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 150..794 17..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:14 Download gff for BO34155.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 150..794 17..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:14 Download gff for BO34155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20817170..20817534 299..663 99 <- Minus
3L 20817597..20817878 17..298 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:02 Download gff for BO34155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20810697..20810978 17..298 100   Minus
arm_3L 20810270..20810634 299..663 99 <- Minus

BO34155.pep Sequence

Translation from 16 to 679

> BO34155.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSMASFLDH

BO34155.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-PA 215 CG3354-PA 1..215 1..215 1152 100 Plus
Mst77Y-9-PA 214 CG45769-PA 1..214 1..215 1000 88.4 Plus
CG45766-PA 214 CG45766-PA 1..214 1..215 994 87.9 Plus
CG45764-PA 214 CG45764-PA 1..214 1..215 994 87.9 Plus
CG45770-PA 214 CG45770-PA 1..214 1..215 985 87 Plus