BO34158.complete Sequence
679 bp assembled on 2013-05-14
GenBank Submission: KX794739
> BO34158.complete
GAAGTTATCAGTCGACATGGCATCCGCTACGGTGCCGCTGCTCGACGATG
ACACGATACCCTTTGGCGAGGAGGACGAGATGCGGGATCCCAGTCGCGCG
GGTCAGAAATACACGCACCCGTACGTCACCTTCTTCCACCTGTTCTTCAG
GGGCGCCGCCATCCTGATCTATATGTTCTGCGGTTGGTTCAGCGACTCCT
TCATCACCAGCTTCGTTTTCGTGGTGCTCTTCCTGTCCGCCGACTTCTGG
ACGGTGAAGAACATCTCGGGCAGATTGCTGGTGGGTCTCCGCTGGTGGAA
CTACGTCGACGACGATGGCGTATCGCACTGGGTGTTTGAGTCAAAGAACA
GTCGGGTCAACAAGAACGAGCAGCGCATCTTCTGGCTGGGACTCATCCTC
TGTCCCGTCTTCTGGGGCCTCTTCTTCCTGTTCGCCCTATTCGGCCTGAA
GTTCAAATGGCTACTGCTGGTAATGATCGCCATTGCGCTGAATGCCGCCA
ATCTGTATGGCTACGTCAAGTGTAACTATGGCGCCAATAAGGATCTGAAT
TCCGCCGCCACAGACTTTGTGAAAACGCAGTTCTTCAAGAATGCCGTGGA
CATCATGACAAGGCCCAGTGGCGCCCCACCGCCCACAAATGTACGCCCGA
CGGGAGTCGTTGCAAGCTTTCTAGACCAT
BO34158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-RB | 648 | CG5021-PB | 1..645 | 17..661 | 3180 | 99.5 | Plus |
CG5021-RA | 657 | CG5021-PA | 25..654 | 32..661 | 3105 | 99.5 | Plus |
CG5021-RD | 663 | CG5021-PD | 1..660 | 17..661 | 2995 | 97.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-RB | 1007 | CG5021-RB | 140..785 | 16..661 | 3185 | 99.5 | Plus |
CG5021-RA | 933 | CG5021-RA | 165..794 | 32..661 | 3105 | 99.5 | Plus |
CG5021-RD | 1022 | CG5021-RD | 140..800 | 16..661 | 3000 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8967581..8967892 | 350..661 | 1530 | 99.4 | Plus |
3L | 28110227 | 3L | 8967278..8967516 | 111..349 | 1165 | 99.2 | Plus |
3L | 28110227 | 3L | 8967127..8967211 | 31..115 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:34:34 has no hits.
BO34158.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:19 Download gff for
BO34158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 130..774 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:49 Download gff for
BO34158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 141..785 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:03 Download gff for
BO34158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 141..785 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:03 Download gff for
BO34158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8967128..8967210 | 32..114 | 100 | -> | Plus |
3L | 8967282..8967516 | 115..349 | 99 | -> | Plus |
3L | 8967581..8967892 | 350..663 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:49 Download gff for
BO34158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8960228..8960310 | 32..114 | 100 | -> | Plus |
arm_3L | 8960382..8960616 | 115..349 | 99 | -> | Plus |
arm_3L | 8960681..8960992 | 350..663 | 98 | | Plus |
BO34158.pep Sequence
Translation from 16 to 679
> BO34158.pep
MASATVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAIL
IYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDD
GVSHWVFESKNSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLL
LVMIAIALNAANLYGYVKCNYGANKDLNSAATDFVKTQFFKNAVDIMTRP
SGAPPPTNVRPTGVVASFLDH
BO34158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-PB | 215 | CG5021-PB | 1..215 | 1..215 | 1161 | 100 | Plus |
CG5021-PA | 218 | CG5021-PA | 1..218 | 1..215 | 1147 | 98.6 | Plus |
CG5021-PD | 220 | CG5021-PD | 1..220 | 1..215 | 1145 | 97.7 | Plus |
CG5021-PC | 223 | CG5021-PC | 1..223 | 1..215 | 1131 | 96.4 | Plus |