Clone BO34159 Report

Search the DGRC for BO34159

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG15482-RA
Protein status:BO34159.pep: Imported from assembly
Sequenced Size:961

Clone Sequence Records

BO34159.complete Sequence

961 bp assembled on 2013-05-14

GenBank Submission: KX798028

> BO34159.complete
GAAGTTATCAGTCGACATGACTGCGCCATTTACCTCGCGTACCAACCAGG
CCGCCGATTCCGGCAAAGATCAATCTCCCATCCATGGATTGAGCCGGAAT
CGAAAGCGTCAGGAGAGGCGAAAGCAGCGCCTGCAGGAAATGCAAGATTT
GCTGTACACGAAACACTTTTCCAACTACAGACTGCCGGCATCGGTGGCCG
CGCCAGCTCCCGAGGATCAGCTGCTCCTCAAACTGCAGAACTTCGAATCG
CTGACCGAGCAGCCGTCCAGCAGCAGGAAGAGCACTGCGACCACATCTAG
CGATTCGCCGTGGAGCCGACTGCGCCTGGTGGCATGCCCATGTCACGGAT
GCCTATGCTCGGTTGACCCCAGCGCTCTGTTGGGTCACTATTTGAGTGAC
CATCTGCCGGGAATGGGAGTTCCGTTTTATGAACTGGAAATGGGCAAGCG
AGTGTCACTAACATGTCATATTAGTAGCCTGGAAAGAGATGTCAACACCC
TGCTGGGGGTCTATGGCTATCGGCGCACTGGCCTTAATCCTCTGAAATGT
CACCGAAACACCCATCTGCCAGTGGAGTACCGCCGCTTCTCGCAGCATAG
CGCCCTTATGATCTTCGCCTGCCGCACCATGCACTCGGTGCTGTGGGAAA
GGAAGCGTGTCAAACACGAAGTCCTGGCCATCTGGGTGGCTACTCCTTTG
CACGGCGTGGCCATCACTCTGCGCCTGCTGGTCCAACCTGCCAACCTGCC
ACGTTACTACACCAGACAGATAAAAGCTCGTCCAATGCTGCCACTGTCGT
CGAACCAATCCTGCAGTGAGTTCATCAAGACCGACAGCAACGTGATCCTC
ATCAGCTTGAATGACCTCCGGCCACTAATGGATTTAGATGTTTGGCAGCA
ATCGCTAACCGTCGAACTGAAAGTGATTAGCGAGGCAAGTATAGCAAGCT
TTCTAGACCAT

BO34159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-RA 930 CG15482-PA 1..927 17..943 4635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-RA 1042 CG15482-RA 34..960 17..943 4635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13210855..13211781 943..17 4635 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:34:39 has no hits.

BO34159.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:21 Download gff for BO34159.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..960 17..945 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:52 Download gff for BO34159.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..960 17..945 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:04 Download gff for BO34159.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..960 17..945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:04 Download gff for BO34159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13210853..13211781 17..945 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:52 Download gff for BO34159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13210853..13211781 17..945 99   Minus

BO34159.pep Sequence

Translation from 16 to 961

> BO34159.pep
MTAPFTSRTNQAADSGKDQSPIHGLSRNRKRQERRKQRLQEMQDLLYTKH
FSNYRLPASVAAPAPEDQLLLKLQNFESLTEQPSSSRKSTATTSSDSPWS
RLRLVACPCHGCLCSVDPSALLGHYLSDHLPGMGVPFYELEMGKRVSLTC
HISSLERDVNTLLGVYGYRRTGLNPLKCHRNTHLPVEYRRFSQHSALMIF
ACRTMHSVLWERKRVKHEVLAIWVATPLHGVAITLRLLVQPANLPRYYTR
QIKARPMLPLSSNQSCSEFIKTDSNVILISLNDLRPLMDLDVWQQSLTVE
LKVISEASIASFLDH

BO34159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-PA 309 CG15482-PA 1..309 1..309 1612 100 Plus