BO34161.complete Sequence
928 bp assembled on 2013-05-14
GenBank Submission: KX796358
> BO34161.complete
GAAGTTATCAGTCGACATGCCGAAAAACGGAGGTGCTGGTCACAGGAACA
CTGCTCCCAGGAAGCGCCAAATACCGGCTGCCCAGCTGGATGAAGACAGT
CCCATTGTCCAACAATTTCGAATTTATTCTAATGAATTGATCATGAAACA
CGATCGCCACGAGCGAATTGTCAAGCTGAGCCGTGACATTACCATCGAGT
CCAAGCGTATCATCTTCCTGCTGCACTCCATTGACTCGCGTAAGCAGAAT
AAGGAGAAGGTCCTGGAGGAGGCACGTCAGCGACTGAACAAGCTGATCGC
GGTTAACTTTAGGGCTGTGGCCCTGGAACTGCGCGACCAGGATGTCTACC
AGTTCCGCAGCTCCTACTCTCCAGGATTGCAGGAGTTTATCGAGGCCTAC
ACCTACATGGAGTACCTGTGCCACGAGGATGCTGAGGGCGAGAACGAAAC
CAAGAGCGTTTCAGATTGGCAGGCCATTCAGGCGGTGATGCAGTACGTCG
AGGAGAGCAGCCAGCCAAAGGAAGAACCAACTGAAGGCGAAGATGTTCAG
GCTATAGCTCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTTCGTAGACCC
CACGGAATATATACTTGGACTTTCGGATCTTACTGGTGAACTGATGCGCC
GCTGCATAAATTCGCTAGGCAGTGGAGATACAGACACCTGTTTGGACACC
TGCAAGGCCCTGCAGCATTTCTACAGCGGTTACATCAGTCTAAACTGTCA
GAGAGCCCGTGAACTATGGCGTAAGATCACTACCATGAAGCAGAGCGTTC
TTAAGGCCGAGAATGTTTGCTACAATGTAAAAGTTCGCGGCGGAGAGGCT
GCAAAATGGGGCGCCACTTTTGATCAAAAGCCAGCCGATGAAGTTGACGA
GGGCTTCTACGCAAGCTTTCTAGACCAT
BO34161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-RB | 897 | CG5063-PB | 1..894 | 17..910 | 4470 | 100 | Plus |
Trax-RA | 777 | CG5063-PA | 1..713 | 17..729 | 3565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-RB | 1077 | CG5063-RB | 134..1027 | 17..910 | 4470 | 100 | Plus |
Trax-RA | 1127 | CG5063-RA | 134..846 | 17..729 | 3565 | 100 | Plus |
Trax-RA | 1127 | CG5063-RA | 896..1077 | 729..910 | 910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15361825..15362537 | 17..729 | 3565 | 100 | Plus |
3R | 32079331 | 3R | 15362587..15362768 | 729..910 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:35:20 has no hits.
BO34161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:35 Download gff for
BO34161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 102..995 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:12 Download gff for
BO34161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 134..1027 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:19 Download gff for
BO34161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 134..1027 | 17..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:19 Download gff for
BO34161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15361825..15362537 | 17..729 | 100 | -> | Plus |
3R | 15362588..15362768 | 730..912 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:12 Download gff for
BO34161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11187547..11188259 | 17..729 | 100 | -> | Plus |
arm_3R | 11188310..11188490 | 730..912 | 98 | | Plus |
BO34161.pep Sequence
Translation from 16 to 928
> BO34161.pep
MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER
IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA
VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD
WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL
GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL
WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGATFDQKPADEVDEGFYAS
FLDH
BO34161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-PB | 298 | CG5063-PB | 1..298 | 1..298 | 1551 | 100 | Plus |
Trax-PA | 258 | CG5063-PA | 1..241 | 1..241 | 1235 | 99.2 | Plus |