BO34172.complete Sequence
1003 bp assembled on 2013-05-14
GenBank Submission: KX793752
> BO34172.complete
GAAGTTATCAGTCGACATGGAGTTTCTGGACCCAAAGATCCACAGCGCCG
ACAAGTTGTGCGACCAATTCGAAGAGTATAAAAAGAAGCGTGAGGAAGCG
CACTTGGAGCTGAAGAACAAGGTGAACACCATGTTCAATTTGAAAGCGGA
TATCAAGGAGCTCAACGAAAATATGGAAACACTTCGCATTGGAATGCAAC
AGCTGGATGACCAGCAGAAGGTTCAGCTGCATCAGGGAAAGCTAATGTCT
CAGTCGATGTTCGGTACCATTGAGGCTGCTCCTCCAGATGAAGGACAAGT
CCCTTTGAAGGACGAAGATACCATACCCAACAAGCTCTTGATAAAGTCCG
AGGTAAAAAAATGTCTCTTTGAGGGCTGCCAAAGGCGAATAGACAGCCAG
TTGCTTTTGCTGCACTACCTATGTGATCATGAGAACAAGGAAGCTTCCTT
TCAGCGCTTTCTTCCCGTAGTGAAACATGAACGGGCTGTGCTTTCTTTTA
AGCCGACGAGCTGTAAGAATCCTGATAATCAGGTGTTGGGACTCCTGGCT
TACAATGCACAACAGTTATTGATATCCCAGCGGCAATGTGAGCCCTATAA
CAGCTTCCCGCTGAACCAACACTCGCACCTGGATAGTCACATCCCGTTGG
TGGTGCTAATTTCCCAGACATTGCCCAATACGGCTCTGCGGAATAGGCGT
TCACCAGATAGCCACAGAAACAGTGAGTTCGTCCTCTGGCTGGTTACACC
CAGCGACGGACTGCAGTTGAACGTTACGCTCAGTCTCTATGGAAGAGATG
TTGCACTAAGAACCAGCTGTGTTTTAGGTGTTCGAAAGGTTAATAATAAC
CGGGACGCGGACTATTACATGGCAGTCGACGAAAGTTACTGGCGTCTGAC
GTACGCCGAAGTGGAGAAACTCTCAAACAACTTTCGTGACGAACTCCACC
TGGAGGTTGTAGTTACTGAGTCCGAGGGAAACGTGGCAAGCTTTCTAGAC
CAT
BO34172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12923-RB | 972 | CG12923-PB | 1..969 | 17..985 | 4845 | 100 | Plus |
CG12923-RA | 972 | CG12923-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12923-RB | 1838 | CG12923-RB | 103..1071 | 17..985 | 4845 | 100 | Plus |
CG12923-RA | 1234 | CG12923-RA | 103..1071 | 17..985 | 4845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9887750..9888718 | 17..985 | 4845 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:35:16 has no hits.
BO34172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:33 Download gff for
BO34172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12923-RA | 103..1071 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:10 Download gff for
BO34172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12923-RA | 103..1071 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:18 Download gff for
BO34172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12923-RA | 103..1071 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:18 Download gff for
BO34172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9887750..9888718 | 17..987 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:10 Download gff for
BO34172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5775255..5776223 | 17..987 | 99 | | Plus |
BO34172.pep Sequence
Translation from 16 to 1003
> BO34172.pep
MEFLDPKIHSADKLCDQFEEYKKKREEAHLELKNKVNTMFNLKADIKELN
ENMETLRIGMQQLDDQQKVQLHQGKLMSQSMFGTIEAAPPDEGQVPLKDE
DTIPNKLLIKSEVKKCLFEGCQRRIDSQLLLLHYLCDHENKEASFQRFLP
VVKHERAVLSFKPTSCKNPDNQVLGLLAYNAQQLLISQRQCEPYNSFPLN
QHSHLDSHIPLVVLISQTLPNTALRNRRSPDSHRNSEFVLWLVTPSDGLQ
LNVTLSLYGRDVALRTSCVLGVRKVNNNRDADYYMAVDESYWRLTYAEVE
KLSNNFRDELHLEVVVTESEGNVASFLDH
BO34172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12923-PB | 323 | CG12923-PB | 1..323 | 1..323 | 1684 | 100 | Plus |
CG12923-PA | 323 | CG12923-PA | 1..323 | 1..323 | 1684 | 100 | Plus |
CG11227-PA | 753 | CG11227-PA | 473..748 | 47..318 | 157 | 20.9 | Plus |
CG11227-PB | 764 | CG11227-PB | 484..759 | 47..318 | 157 | 20.9 | Plus |