Clone BO34174 Report

Search the DGRC for BO34174

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG3942-RA
Protein status:BO34174.pep: Imported from assembly
Sequenced Size:2251

Clone Sequence Records

BO34174.complete Sequence

2251 bp assembled on 2013-09-16

GenBank Submission: KX799093

> BO34174.complete
GAAGTTATCAGTCGACATGCATCGATGGTTCTTTGCCAACGAGCGGGAGG
AGTGTGAGCGAAAACCGGAGGAAGACGGTCCTAGTAGCGCTTCGGAGACA
CAAGAGCCACCACCTCCACCACCAGTTCCGACTACTGAGTGGCCCTTCTG
TGTAGTCTTTCACAGTTCACTAAACGGTAATGAGTATGTTGCCATTAGTG
GCAACTGTCCCTCTCTTGGAAACTGGGATCCCAAGGAGGTGTACATTTTG
GCCAAGAATGACTGCATTAGCTGCCTATGCAATTGCCGTCAGTTTGAGGC
AAGCTTAGAGATACCGCGTAACATCGACATCCACTATCGGTACTGCGTCG
TGATCCACGATCCCGAGACGGATGAGGTGTATATACGCTTCTGGGAGTCC
CAATTATATCCCAGAGTGATTCGAACTTGTCAGAACATGCTGAAGAACTG
CGACGTCTTTGGAAAACCACACGACGATGATGAAGCGAACCAGGTGGATC
GCGGCTGGGCCACCACAGAGACAATTGTGCACCTGAAGATCTTCAATGCT
CCATTCTGTTGGCAACGTCAGAAACCGAGGCTCCTGTATGTCCATGTGCA
GCCCATGTTTGAGGTGCCGGAGAATCCTTGTAACGAACCAGCCAATCCCA
TCAAAATGGTTTCGTCGCAAACACGTTTATCGCGTTATCTGAGCACCCGG
GAAATTAAGGCAGGGAACCAGTATCTTCAATTGGCACAAGTCGAGGTGAC
CAATCTATGTGTCCAAAATGCTTTGGCCGCGCAGCAACGATTTGGAGCCA
GATGTGGGCCGAAGGATATGGAGCTATTTCATTGTTCCATCGCTTTTCCG
GAGGAAACGCTCTACCGACTGGATTTGTACACATACGCGCATAAAGCAGG
CTATGATGAACCACCGTATCATTACGGGTACGGATTCCTGATGCCAGATC
AGCTGCTGGGCACCGAAGGCTCTGCCCGGGTGAAGATCACTTGCGCCTCC
ACCCACCGTCCACTAATGGAGATGTGTGTACGCTATCTAATAATTCGACC
TTTGCCAAATTTCCGTTGCGATTTGAGCCACAGCTACGAGCGTTACTGGC
GCAAAAATCGCCTATGCATGAACATCGGGCACAAAGGATCGGGAAATACG
TACCGGTTAGGATCCGATGTGGTAAGGGAGAATACCTTGTATGGTTTCAA
GCAGGCTGTTTTGGCCAATGCAGACATGGTGGAGATGGATGTCCAGCTCA
CGCAGGATGCCCAGGTGGTGGTGTATCACGATTTTGTACTGCGATTTATG
TTGCAGAGAATGCCTAGTTTTGAGGATCTTCTGGAGAATCAGGATCTGCT
GATATTTGCCTACGAAAATCTTAACAAACTAATGCTCCTCGCTATGGGAG
GATCAAAACGAAAAGACCTCATTGCCGTTCCCCTGGAGGCATTTTCCTAC
GATCAACTGAAGGAGGTGAAGGTCCTGCGATTCGCTGGCAGCAAAGGCTG
CGATAAGTCCTGTGATCGAATGCTGCTGGAGCAGCGCCCCTTTCCCCTGC
TCCTCGACCTCCTGGATGAGGAAAATCTACCCGTCGACATGGGCTTCCTA
ATCGAGATCAAGTGGCCGCAGATGACCAATATGCGGCGTTGGGAGAGCGG
CAGCTTTAAGCCCACGTTCGATCGAAACTTCTATGTGGACACCATATTGG
AGATTGTTTTAAATAAGGCTGGAAAGAGGCGCATAGTCTTTTGCAGCTTC
GATGCCGACATCTGTGCCATGGTTCGGTTTAAGCAGAATGTATATCCCGT
GACTTTACTACTGGAGGATCCGCACTCGCCGGTTCAGTATGCAGACCAAA
GGGTAAGCGTGCAGGATGTTGCCGTGAGGTTTTGCAACAGTCTGGAGTTC
CTTGGGCTGACCCTTCATGCTAACTCACTGCTGAACAAGCCCTCGACTAT
GGCATACCTGCACCAGATCAATCTGGACGCTTTTGTTTATGGTAGTTCCA
CCATTGACCTGGAGATCCGCAATAAGCTAAAGAAGCACGGAGTGCTGGGA
ATAATCTACGATCGTCTCGACCAACTGGACCAAGTGGGCGAAGAGCTGGA
GGGGGACACCATGTGCACCATTGATTCAGTGACCACAAGGCGCGTGATCC
AGGAGACGGAGGTGGAGGAGTGGATCCAGAAGTGTGGCTACAAGCCGGAA
ACTTCCATCGTCGTACATAACATTTACATCGACGCAAGCTTTCTAGACCA
T

BO34174.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG3942-RA 2220 CG3942-PA 1..2217 17..2233 11085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG3942-RA 2406 CG3942-RA 120..2337 16..2233 11090 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12254306..12256523 16..2233 11090 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:46:25 has no hits.

BO34174.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:53 Download gff for BO34174.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 121..2337 17..2235 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:47 Download gff for BO34174.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 121..2337 17..2235 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:47 Download gff for BO34174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12254307..12256523 17..2235 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:53 Download gff for BO34174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8080029..8082245 17..2235 99   Plus

BO34174.pep Sequence

Translation from 16 to 2251

> BO34174.pep
MHRWFFANEREECERKPEEDGPSSASETQEPPPPPPVPTTEWPFCVVFHS
SLNGNEYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIP
RNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGK
PHDDDEANQVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEV
PENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQ
NALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPP
YHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFR
CDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLA
NADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYE
NLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCD
RMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPT
FDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLE
DPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQ
INLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMC
TIDSVTTRRVIQETEVEEWIQKCGYKPETSIVVHNIYIDASFLDH

BO34174.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3942-PA 739 CG3942-PA 1..739 1..739 3976 100 Plus
CG2818-PA 707 CG2818-PA 1..662 1..687 974 35.6 Plus
CG2818-PB 521 CG2818-PB 2..476 186..687 714 35.8 Plus
CG9394-PB 679 CG9394-PB 70..631 56..685 528 27.2 Plus
CG9394-PA 679 CG9394-PA 70..631 56..685 528 27.2 Plus