BO34176.complete Sequence
724 bp assembled on 2013-05-14
GenBank Submission: KX799931
> BO34176.complete
GAAGTTATCAGTCGACATGGACATCTCCCAATCGGACGACCTATACGAAT
GCGGAGTGGAGAGGGAAAGGGAGACTGTCCATCAGTCATCGCGCACCGTG
AGAGATCCCCTTCAGGTGTTCCATTGGATAGCGTCTTTGGATGTGGCCCA
GCTGGAGGACGAGACACCGCCCCCCAGTTTCTACTTCGATTTGCTGGAGA
CAAATGACGTCGAACTGGACTGCAGTGTTTACAGCGGAAAGCTTCTTGTA
ACGCTCGGTAGTCAGACAGATGTGTCGCAGCCAGAAGTTTCGCAGGAGTA
TGCAGACAACGCACTGGCGGTGGAACCAACAGATCTGAAAATATCAATAC
CTGAAGATGCGACAGCCTGCCCATGTCATGCCGCATCTGATGATGAAGTA
TCAATTACAATATTTGTAGAAAGCGAAACTGAACCGGAACCACGTGGGAA
CTCCGAGCATCAACCAAGTCGCTTTTCGTTTTTTGGCATGTTGCTAAAGG
CGGTCGTGGCACTGTCCGTGGTGAACGCCCTTTATGTTCTGTGGACGATC
GGCTTTGAGGCCTTCAAGAACCGCGTATGGCAGTCATCTTCTGTGAATAT
GCCACCGCCTCGGACTACATCGATCAGGGAGACGCGTGCTTCGCTGCCCG
AGAGCATTTGGCGAAGTGTTGAAGCTAAATTGGCTAGCCTGCGAGCCCGC
TTGAACGCAAGCTTTCTAGACCAT
BO34176.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14053-RB | 693 | CG14053-PB | 1..690 | 17..706 | 3435 | 99.9 | Plus |
| CG14053-RA | 693 | CG14053-PA | 1..690 | 17..706 | 3435 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14053-RB | 1766 | CG14053-RB | 435..1124 | 17..706 | 3435 | 99.9 | Plus |
| CG14053-RA | 1109 | CG14053-RA | 90..779 | 17..706 | 3435 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2192281..2192970 | 706..17 | 3435 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:35:36 has no hits.
BO34176.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:40 Download gff for
BO34176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14053-RA | 90..779 | 17..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:21 Download gff for
BO34176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14053-RA | 90..779 | 17..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:28 Download gff for
BO34176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14053-RA | 90..779 | 17..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:28 Download gff for
BO34176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2192279..2192970 | 17..708 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:21 Download gff for
BO34176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2086312..2087003 | 17..708 | 99 | | Minus |
BO34176.pep Sequence
Translation from 16 to 724
> BO34176.pep
MDISQSDDLYECGVERERETVHQSSRTVRDPLQVFHWIASLDVAQLEDET
PPPSFYFDLLETNDVELDCSVYSGKLLVTLGSQTDVSQPEVSQEYADNAL
AVEPTDLKISIPEDATACPCHAASDDEVSITIFVESETEPEPRGNSEHQP
SRFSFFGMLLKAVVALSVVNALYVLWTIGFEAFKNRVWQSSSVNMPPPRT
TSIRETRASLPESIWRSVEAKLASLRARLNASFLDH
BO34176.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14053-PB | 230 | CG14053-PB | 1..230 | 1..230 | 1184 | 100 | Plus |
| CG14053-PA | 230 | CG14053-PA | 1..230 | 1..230 | 1184 | 100 | Plus |
